Homologs in group_2679

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05010 FBDBKF_05010 50.1 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_12580 EHELCC_12580 50.1 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_12920 NLDBIP_12920 50.1 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_12780 LHKJJB_12780 50.1 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_11395 HKOGLL_11395 50.1 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain

Distribution of the homologs in the orthogroup group_2679

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2679

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55140 9.53e-27 111 40 5 167 3 ygcG UPF0603 protein YgcG Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13025
Feature type CDS
Gene -
Product TPM domain-containing protein
Location 2886711 - 2887889 (strand: -1)
Length 1179 (nucleotides) / 392 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2679
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04536 TPM domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1512 Function unknown (S) S Uncharacterized membrane protein YgcG, contains a TPM-fold domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06872 uncharacterized protein - -

Protein Sequence

MIRKVLFLFSLFLFSFSVIVSASANDIPQLKTDRVIDSANLLTAQQFKALNTLLVNFENSRNDGSQFVVYIVPTTGKETIESFAFRVFNQWKIGRKGKDNGLLLVVAINDRNVRFEVGYGYEGALTDVLAGRIIRNEMLPFFRSNNYYAGIEQGVKNAIQAVNHEPISFTNSQINTNTLKIFHTHFILIYLVILGGVYWFQLIFSTRKIKTKINQLLAPRGRKKKNPADQKGKLSIKQRKQLKNYLQYSYYFPTFSTLFFPMTLCFAAAMFYTQVFLDGIIDNFVLVIIVILSLLCNFIVLVVLFGIINLLFPIYRQQRKEWKAICVASPFGSPFNQLPYSKRIRRRSGYSGSGGYSSSSYSSSSSSSSSSSSSSSGGGGGSSGGGGASGSW

Flanking regions ( +/- flanking 50bp)

GTTGAGAGTGAACAGGAAATAAAAGTAACACCAGTGGTGGACTTTGCCTCATGATACGTAAGGTTTTATTCTTATTCTCATTGTTCTTATTTAGCTTTAGCGTGATAGTGAGTGCATCAGCGAATGATATTCCTCAACTAAAAACAGATAGAGTGATTGATAGTGCAAATTTATTGACTGCACAACAATTCAAAGCGTTAAATACTTTATTGGTTAACTTCGAAAATAGTCGTAATGATGGATCACAATTTGTTGTCTATATCGTTCCAACGACAGGGAAAGAAACCATCGAATCCTTTGCTTTTCGTGTTTTTAATCAATGGAAGATAGGCAGAAAAGGGAAAGATAATGGATTATTGCTCGTGGTGGCAATTAATGATCGTAATGTTCGTTTTGAAGTCGGGTATGGCTATGAGGGAGCATTAACTGATGTACTGGCAGGACGAATTATTCGCAATGAAATGTTGCCATTTTTTCGTTCAAATAATTATTATGCAGGCATCGAACAAGGGGTTAAAAATGCTATTCAAGCCGTTAATCATGAACCAATAAGTTTCACTAACTCACAGATAAATACTAATACACTTAAAATATTCCACACACATTTTATCCTAATTTATTTGGTAATATTAGGCGGTGTTTATTGGTTTCAGTTGATATTCTCGACGCGAAAAATAAAAACCAAAATTAATCAATTATTAGCGCCTAGAGGAAGAAAAAAGAAAAATCCAGCAGACCAAAAAGGTAAGTTAAGTATAAAGCAACGTAAACAGTTGAAAAATTATCTGCAATATTCGTACTATTTTCCTACATTTTCAACGTTATTTTTCCCCATGACACTCTGTTTTGCGGCGGCGATGTTTTATACACAAGTCTTTCTTGATGGTATTATTGATAATTTTGTTTTAGTGATAATAGTCATATTGTCATTATTATGTAATTTTATCGTATTAGTGGTTTTATTTGGTATTATCAACCTGTTATTTCCAATTTATCGGCAACAACGAAAAGAATGGAAAGCGATTTGTGTCGCTAGTCCGTTTGGTTCACCGTTTAATCAACTGCCATATTCAAAACGTATTCGTAGACGTAGTGGTTATTCAGGCTCTGGTGGTTATTCGAGTTCGTCTTATTCATCAAGTTCATCAAGTTCATCCAGCTCTTCTAGTTCTTCTAGCGGTGGCGGCGGTGGTTCGAGTGGTGGTGGGGGTGCTTCAGGGAGTTGGTAGAGGAATATGTCGCTATTTTTATCTTATGATGCAATCACCAGAGCGTAATC