Homologs in group_2314

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17775 FBDBKF_17775 62.8 Morganella morganii S1 tatD 3'->5' ssDNA/RNA exonuclease TatD
EHELCC_09800 EHELCC_09800 62.8 Morganella morganii S2 tatD 3'->5' ssDNA/RNA exonuclease TatD
NLDBIP_10180 NLDBIP_10180 62.8 Morganella morganii S4 tatD 3'->5' ssDNA/RNA exonuclease TatD
LHKJJB_07575 LHKJJB_07575 62.8 Morganella morganii S3 tatD 3'->5' ssDNA/RNA exonuclease TatD
HKOGLL_07125 HKOGLL_07125 62.8 Morganella morganii S5 tatD 3'->5' ssDNA/RNA exonuclease TatD
F4V73_RS15190 F4V73_RS15190 63.5 Morganella psychrotolerans - TatD family hydrolase

Distribution of the homologs in the orthogroup group_2314

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2314

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39408 9.24e-100 294 58 1 257 1 yjjV Uncharacterized metal-dependent hydrolase YjjV Escherichia coli (strain K12)
P44500 1.2e-74 231 47 4 259 3 HI_0081 Uncharacterized metal-dependent hydrolase HI_0081 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37545 5.46e-36 131 28 2 253 3 yabD Uncharacterized metal-dependent hydrolase YabD Bacillus subtilis (strain 168)
P44718 1.13e-35 130 29 3 256 3 HI_0454 Uncharacterized metal-dependent hydrolase HI_0454 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P73335 1.78e-35 130 30 2 256 1 dtd3 D-aminoacyl-tRNA deacylase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P57436 1.14e-33 125 28 3 241 3 BU355 Uncharacterized metal-dependent hydrolase BU355 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9J1 7.03e-32 121 27 4 262 3 BUsg_343 Uncharacterized metal-dependent hydrolase BUsg_343 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P0AFQ7 1.28e-29 115 28 3 257 1 ycfH Uncharacterized metal-dependent hydrolase YcfH Escherichia coli (strain K12)
P0AFQ8 1.28e-29 115 28 3 257 3 ycfH Uncharacterized metal-dependent hydrolase YcfH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AFQ9 1.28e-29 115 28 3 257 3 ycfH Uncharacterized metal-dependent hydrolase YcfH Escherichia coli O157:H7
Q89AG7 9.86e-29 112 25 4 257 3 bbp_325 Uncharacterized metal-dependent hydrolase bbp_325 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
B2VG45 1.66e-26 107 31 6 249 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q9UUF1 5.08e-26 106 30 8 227 3 pi038 Deoxyribonuclease Tat-D Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A1A4M4 4.84e-25 103 29 7 264 2 TATDN3 Putative deoxyribonuclease TATDN3 Bos taurus
E6WHK1 4.96e-25 102 32 9 252 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Pantoea sp. (strain At-9b)
D4ICL5 6.51e-25 102 30 6 249 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Erwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)
Q0SZ31 1.66e-24 101 28 5 250 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Shigella flexneri serotype 5b (strain 8401)
O08343 2.75e-24 101 28 3 221 1 tatD Uncharacterized metal-dependent hydrolase TatD Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P27859 2.8e-24 100 28 5 250 1 tatD 3'-5' ssDNA/RNA exonuclease TatD Escherichia coli (strain K12)
B7LTZ5 7.51e-24 99 27 5 251 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
D8MKW4 2.07e-23 98 30 5 248 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Erwinia billingiae (strain Eb661)
A8G8C4 2.78e-23 98 29 6 249 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Serratia proteamaculans (strain 568)
P78005 8.25e-22 94 24 3 265 3 MPN_009 Uncharacterized metal-dependent hydrolase MPN_009 Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47255 8.58e-22 94 26 3 261 3 MG009 Uncharacterized metal-dependent hydrolase MG009 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
A4WFX9 1.62e-21 93 26 4 260 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Enterobacter sp. (strain 638)
D0Z9R0 2.79e-21 92 30 5 249 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Edwardsiella tarda (strain EIB202)
D4GGR2 3.29e-21 92 28 8 250 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Pantoea ananatis (strain LMG 20103)
E1SKR8 4.63e-21 92 32 7 206 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Pantoea vagans (strain C9-1)
Q17R31 4.81e-21 92 29 7 264 1 TATDN3 Putative deoxyribonuclease TATDN3 Homo sapiens
Q3U1C6 8.82e-21 92 28 8 263 1 Tatdn3 Putative deoxyribonuclease TATDN3 Mus musculus
A7MQN1 1.51e-20 90 27 4 245 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Cronobacter sakazakii (strain ATCC BAA-894)
Q503T5 2.21e-20 90 27 9 267 2 tatdn3 Putative deoxyribonuclease tatdn3 Danio rerio
D2TUZ4 2.89e-20 90 26 4 248 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Citrobacter rodentium (strain ICC168)
Q9L6M2 4.05e-20 89 26 6 252 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q640V9 6.36e-20 90 25 7 291 2 tatdn1 Deoxyribonuclease TATDN1 Xenopus laevis
Q6P8M1 1.08e-19 89 24 7 291 1 Tatdn1 Deoxyribonuclease TATDN1 Mus musculus
C4VAS3 1.09e-19 88 23 9 262 3 NCER_101798 Putative deoxyribonuclease TATDN1 homolog Vairimorpha ceranae (strain BRL01)
D0KC77 1.43e-19 88 28 6 250 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Pectobacterium parmentieri (strain WPP163)
Q93075 1.64e-19 90 31 9 222 1 TATDN2 Putative deoxyribonuclease TATDN2 Homo sapiens
B1JP69 2.08e-19 87 29 7 251 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
E3G381 3.77e-19 87 25 4 257 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Enterobacter lignolyticus (strain SCF1)
C6DI71 4.09e-19 87 27 6 250 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q148G4 4.72e-19 87 24 8 295 2 TATDN1 Deoxyribonuclease TATDN1 Bos taurus
Q6DAQ1 5.55e-19 86 27 5 249 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A8ACY8 5.84e-19 86 25 5 250 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q9PRC8 6.88e-19 86 24 6 261 3 UU017 Uncharacterized metal-dependent hydrolase UU017 Ureaplasma parvum serovar 3 (strain ATCC 700970)
C9XTA5 7.53e-19 86 27 4 245 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Cronobacter turicensis (strain DSM 18703 / CCUG 55852 / LMG 23827 / z3032)
Q58977 8.51e-19 85 23 10 260 3 MJ1582 Uncharacterized metal-dependent hydrolase MJ1582 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
E8XYF5 2.5e-18 85 29 5 206 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Rahnella sp. (strain Y9602)
B5XYH5 3.39e-18 84 28 5 248 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Klebsiella pneumoniae (strain 342)
C6C4V4 4.87e-18 84 28 6 207 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Musicola paradisiaca (strain Ech703)
Q05AV0 7.23e-18 84 26 8 263 2 tatdn3-a Putative deoxyribonuclease tatdn3-A Xenopus laevis
B7XJI2 7.29e-18 84 26 12 269 3 EBI_25826 Putative deoxyribonuclease TATDN1 homolog Enterocytozoon bieneusi (strain H348)
E0SLH6 8.95e-18 83 27 6 248 3 tatD 3'-5' ssDNA/RNA exonuclease TatD Dickeya dadantii (strain 3937)
Q6P1N9 2.19e-16 80 24 8 295 1 TATDN1 Deoxyribonuclease TATDN1 Homo sapiens
Q6GML7 5.03e-15 76 25 7 291 1 tatdn1 Deoxyribonuclease TATDN1 Danio rerio
Q8SW70 1.05e-12 69 35 5 121 3 ECU03_0200 Putative deoxyribonuclease TATDN1 homolog Encephalitozoon cuniculi (strain GB-M1)
Q6GPM3 4.74e-11 64 25 8 264 2 tatdn3-b Putative deoxyribonuclease tatdn3-B Xenopus laevis
P45305 8.42e-10 61 27 10 221 3 HI_1664 Uncharacterized metal-dependent hydrolase HI_1664 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P34220 2.26e-07 54 27 7 191 1 YBL055C Deoxyribonuclease Tat-D Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q58778 2.03e-05 48 24 7 157 3 MJ1383 Uncharacterized protein MJ1383 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58171 0.001 43 30 8 141 3 MJ0761 Uncharacterized metal-dependent hydrolase MJ0761 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11965
Feature type CDS
Gene -
Product metal-dependent hydrolase
Location 2646806 - 2647588 (strand: -1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2314
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01026 TatD related DNase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0084 Cell motility (N) N 3'->5' ssDNA/RNA exonuclease TatD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03424 TatD DNase family protein [EC:3.1.21.-] - -

Protein Sequence

MSRFIDTHCHFDFPVFYHDLENSLALAQQAQVKKIIIPAVAQWNWDAVTELSRYNNALYCALGLHPLYIEAHTEQHLIELKTRLKTTPRCVAMGEMGLDNYMTNPHPEKQQQFLIAQLKLAIEFDLPVILHSRKTHDNLSAILRRYSVPRKGVIHGFSGSLQQAERFVQQGYFIGVGGTITYPRAQKTRRAIASLPLERLLLETDAPDMPVSGFQGEPNRPERILAVFSSLCELRQESAEVIANQLYLNSLQLFQLTDDA

Flanking regions ( +/- flanking 50bp)

ATTCAAAAAAGAACTCGGAGTGTGCACCCTGAAGTAAGGAGTGTTCAAGAATGAGTCGATTTATTGATACGCATTGTCATTTTGATTTTCCCGTCTTTTATCACGACCTTGAGAATAGCCTTGCTTTAGCACAACAGGCTCAGGTAAAAAAAATTATTATTCCTGCGGTTGCTCAGTGGAATTGGGACGCGGTAACGGAATTGTCTCGTTATAACAATGCACTATATTGTGCACTAGGTTTGCATCCTTTATATATTGAAGCGCATACAGAGCAGCACTTGATTGAACTTAAAACACGCCTAAAAACGACGCCACGTTGTGTTGCAATGGGGGAGATGGGTTTGGATAACTATATGACAAATCCACATCCGGAAAAACAGCAACAATTTTTAATAGCACAACTTAAATTGGCGATAGAATTTGATTTACCAGTGATCCTTCATTCACGTAAAACTCATGATAATCTAAGTGCTATTTTGCGCCGTTATTCAGTTCCTCGTAAAGGTGTGATCCATGGTTTTTCCGGCAGTCTGCAACAAGCAGAACGTTTTGTTCAACAAGGCTATTTTATTGGGGTAGGGGGCACTATCACTTATCCACGTGCACAAAAAACACGTCGTGCAATTGCCTCTCTACCCTTAGAGCGCTTGTTATTAGAAACGGATGCGCCTGATATGCCTGTAAGTGGTTTTCAAGGCGAGCCTAACCGCCCTGAGCGAATTCTCGCTGTTTTTTCTTCTCTTTGTGAATTGCGTCAAGAGTCAGCAGAGGTTATTGCAAACCAACTTTACCTGAATAGTCTACAATTATTTCAGTTAACAGATGATGCCTAGTTTTAAGTAAATTAGTAATTACTCTGCCATTCGTATTACCGTTTTTTATT