Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03424
Protein list: lists the 14 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
KO part of 0 pathways
KO part of 0 modules
Occurence in the database
K03424 is associated with 14 different proteins |
The 14 proteins are classified into 2 different orthogroup(s) |
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_2346 | FBDBKF_17775 | 17120 | 17914 | -1 | tatD | 3'->5' ssDNA/RNA exonuclease TatD | Morganella morganii S1 |
1 | group_2346 | EHELCC_09800 | 196552 | 197346 | -1 | tatD | 3'->5' ssDNA/RNA exonuclease TatD | Morganella morganii S2 |
2 | group_2346 | NLDBIP_10180 | 196552 | 197346 | -1 | tatD | 3'->5' ssDNA/RNA exonuclease TatD | Morganella morganii S4 |
3 | group_2346 | LHKJJB_07575 | 19892 | 20686 | 1 | tatD | 3'->5' ssDNA/RNA exonuclease TatD | Morganella morganii S3 |
4 | group_2346 | HKOGLL_07125 | 19892 | 20686 | 1 | tatD | 3'->5' ssDNA/RNA exonuclease TatD | Morganella morganii S5 |
5 | group_1995 | FBDBKF_14680 | 34605 | 35384 | -1 | tatD | metal-dependent hydrolase | Morganella morganii S1 |
6 | group_1995 | EHELCC_15485 | 64681 | 65460 | -1 | tatD | metal-dependent hydrolase | Morganella morganii S2 |
7 | group_1995 | NLDBIP_16015 | 64681 | 65460 | -1 | tatD | metal-dependent hydrolase | Morganella morganii S4 |
8 | group_1995 | LHKJJB_15825 | 51226 | 52005 | 1 | tatD | metal-dependent hydrolase | Morganella morganii S3 |
9 | group_1995 | HKOGLL_14945 | 50438 | 51217 | 1 | tatD | metal-dependent hydrolase | Morganella morganii S5 |
10 | group_1995 | F4V73_RS07475 | 1563240 | 1564019 | -1 | metal-dependent hydrolase | Morganella psychrotolerans | |
11 | group_2346 | F4V73_RS15190 | 17318 | 18100 | 1 | TatD family hydrolase | Morganella psychrotolerans | |
12 | group_1995 | PMI_RS04260 | 957327 | 958112 | 1 | metal-dependent hydrolase | Proteus mirabilis HI4320 | |
13 | group_2346 | PMI_RS11965 | 2646806 | 2647588 | -1 | metal-dependent hydrolase | Proteus mirabilis HI4320 |