Homologs in group_1119

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06380 FBDBKF_06380 67.7 Morganella morganii S1 ygiM TIGR04211 family SH3 domain-containing protein
EHELCC_09425 EHELCC_09425 67.7 Morganella morganii S2 ygiM TIGR04211 family SH3 domain-containing protein
NLDBIP_09805 NLDBIP_09805 67.7 Morganella morganii S4 ygiM TIGR04211 family SH3 domain-containing protein
LHKJJB_07950 LHKJJB_07950 67.7 Morganella morganii S3 ygiM TIGR04211 family SH3 domain-containing protein
HKOGLL_07500 HKOGLL_07500 67.7 Morganella morganii S5 ygiM TIGR04211 family SH3 domain-containing protein
F4V73_RS15545 F4V73_RS15545 65.2 Morganella psychrotolerans - TIGR04211 family SH3 domain-containing protein

Distribution of the homologs in the orthogroup group_1119

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1119

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADU1 1e-77 234 59 2 207 3 ygiM Uncharacterized protein YgiM Shigella flexneri
P0ADT8 1e-77 234 59 2 207 3 ygiM Uncharacterized protein YgiM Escherichia coli (strain K12)
P0ADT9 1e-77 234 59 2 207 3 ygiM Uncharacterized protein YgiM Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADU0 1e-77 234 59 2 207 3 ygiM Uncharacterized protein YgiM Escherichia coli O157:H7
P44272 7.63e-36 127 37 2 185 3 HI_1605 Uncharacterized protein HI_1605 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11675
Feature type CDS
Gene -
Product TIGR04211 family SH3 domain-containing protein
Location 2581611 - 2582231 (strand: 1)
Length 621 (nucleotides) / 206 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1119
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08239 Bacterial SH3 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3103 General function prediction only (R) R Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07184 SH3 domain protein - -

Protein Sequence

MRKLPLLFLSLLGLGVSLSSHAETRYVSDELSTYVHSGPGNQYRIVGSLSSGATVTVLSRNAATGYVQIKDDKDRTVWLPENQLSTQPSMRTRIPAMEKEIQTLRDKLANIDQSWNQRTIDMQNKVSNSDEIINGLKKENEQMRTKLAVAEKKLDFANQQLDDRQRDIILQWFMYGGGVAGAGLILGLILPHIIPRRRKRNDRWMN

Flanking regions ( +/- flanking 50bp)

TAGTATCAGTAAAAATATTCTCTTGTATAGATAAAAAAGTTGAAAACATAATGCGAAAATTACCTTTACTTTTTCTTTCCTTACTTGGCTTAGGCGTTTCTCTGAGCTCACACGCAGAAACTCGTTATGTTTCCGATGAATTATCCACCTATGTTCACAGTGGCCCTGGTAATCAATACCGTATTGTTGGCTCATTAAGTTCAGGGGCAACAGTTACGGTACTTTCTCGTAATGCCGCTACAGGTTATGTGCAAATCAAAGACGATAAAGATCGGACAGTTTGGTTACCAGAAAATCAATTAAGTACACAACCGAGTATGCGCACTCGCATTCCGGCTATGGAAAAAGAGATCCAAACCCTACGCGATAAATTAGCGAATATCGACCAAAGCTGGAACCAGCGCACAATTGACATGCAAAATAAAGTGTCAAACAGCGATGAAATTATCAATGGTTTGAAAAAAGAAAATGAGCAGATGAGAACAAAATTAGCGGTTGCTGAGAAAAAACTCGATTTTGCTAATCAACAATTAGATGATAGGCAGCGTGATATCATCCTACAGTGGTTTATGTATGGTGGTGGTGTTGCCGGTGCTGGTCTTATTTTGGGTTTAATATTGCCACATATTATTCCTCGTCGCCGTAAGCGTAATGACCGTTGGATGAATTAATCACAGGCAATTAAGGATCAAGATCCCGTGAAAATCTACCTTGTTGGTGG