Homologs in group_1181

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06380 FBDBKF_06380 91.2 Morganella morganii S1 ygiM TIGR04211 family SH3 domain-containing protein
EHELCC_09425 EHELCC_09425 91.2 Morganella morganii S2 ygiM TIGR04211 family SH3 domain-containing protein
NLDBIP_09805 NLDBIP_09805 91.2 Morganella morganii S4 ygiM TIGR04211 family SH3 domain-containing protein
LHKJJB_07950 LHKJJB_07950 91.2 Morganella morganii S3 ygiM TIGR04211 family SH3 domain-containing protein
HKOGLL_07500 HKOGLL_07500 91.2 Morganella morganii S5 ygiM TIGR04211 family SH3 domain-containing protein
PMI_RS11675 PMI_RS11675 65.2 Proteus mirabilis HI4320 - TIGR04211 family SH3 domain-containing protein

Distribution of the homologs in the orthogroup group_1181

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1181

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADU1 2.01e-74 226 56 1 206 3 ygiM Uncharacterized protein YgiM Shigella flexneri
P0ADT8 2.01e-74 226 56 1 206 3 ygiM Uncharacterized protein YgiM Escherichia coli (strain K12)
P0ADT9 2.01e-74 226 56 1 206 3 ygiM Uncharacterized protein YgiM Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADU0 2.01e-74 226 56 1 206 3 ygiM Uncharacterized protein YgiM Escherichia coli O157:H7
P44272 3.74e-36 128 38 2 185 3 HI_1605 Uncharacterized protein HI_1605 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15545
Feature type CDS
Gene -
Product TIGR04211 family SH3 domain-containing protein
Location 101985 - 102602 (strand: -1)
Length 618 (nucleotides) / 205 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000005
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1181
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08239 Bacterial SH3 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3103 General function prediction only (R) R Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07184 SH3 domain protein - -

Protein Sequence

MKKLALLPLLFAALGSLTAYAEETRYVSDDLSTYVHSGPSARYRIAGSLNSGEKVTVINVNNETGFVQVRDSKNRDVWLPKEMLSATPSLKERVPAMEDEIKTLRGKLANIDGTWNDKTADIQNRVAASDDIIDNLKKENDSLRNQVVVAKKKLDAISVQLDDKQRDIILQWFMYGGGVAGVGLLLGLLLPHMVPRRKKKDRWMN

Flanking regions ( +/- flanking 50bp)

TAACTCATTAGTATGCTATTTCATAACCAACGAATGATAAGTCTATGACGATGAAAAAACTCGCCTTATTACCTTTGTTATTTGCAGCCCTTGGCAGCCTGACCGCATATGCTGAAGAAACCCGCTATGTGTCTGATGATCTGTCCACTTATGTTCACAGTGGTCCCAGCGCCCGTTATCGTATCGCAGGTTCACTGAATTCGGGTGAAAAAGTCACCGTCATTAATGTGAATAATGAAACCGGTTTTGTCCAGGTCCGCGACAGTAAAAACCGCGATGTCTGGCTGCCGAAAGAAATGCTGAGTGCCACGCCAAGCCTGAAAGAGCGTGTTCCGGCAATGGAAGATGAAATAAAAACACTGCGCGGAAAACTCGCCAATATCGACGGAACCTGGAATGACAAAACCGCCGATATACAAAACCGCGTGGCCGCCAGTGATGACATCATCGATAACCTGAAAAAAGAGAATGACAGCCTGCGTAACCAGGTCGTGGTCGCGAAGAAAAAACTCGATGCCATCAGTGTCCAGTTAGATGATAAGCAACGCGATATTATACTGCAATGGTTTATGTATGGTGGTGGTGTTGCCGGTGTCGGGCTGCTGCTGGGTCTGTTACTGCCGCACATGGTTCCCCGCCGGAAGAAAAAAGATCGCTGGATGAACTGATGCTGCAACCGCACCAGTTCAGGAGGTTATAGTGGAAATTTACCTGGTCG