Homologs in group_902

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04760 FBDBKF_04760 42.5 Morganella morganii S1 agaW PTS N-acetylgalactosamine transporter subunit IIC
EHELCC_06050 EHELCC_06050 42.5 Morganella morganii S2 agaW PTS N-acetylgalactosamine transporter subunit IIC
NLDBIP_06370 NLDBIP_06370 42.5 Morganella morganii S4 agaW PTS N-acetylgalactosamine transporter subunit IIC
LHKJJB_03250 LHKJJB_03250 42.5 Morganella morganii S3 agaW PTS N-acetylgalactosamine transporter subunit IIC
HKOGLL_06725 HKOGLL_06725 42.5 Morganella morganii S5 agaW PTS N-acetylgalactosamine transporter subunit IIC
F4V73_RS09230 F4V73_RS09230 41.7 Morganella psychrotolerans agaW PTS N-acetylgalactosamine transporter subunit IIC

Distribution of the homologs in the orthogroup group_902

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_902

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42910 6.11e-43 149 33 4 259 1 agaC N-acetylgalactosamine permease IIC component 1 Escherichia coli (strain K12)
P42905 4.48e-30 112 42 0 121 5 agaW Putative N-acetylgalactosamine permease IIC component 2 Escherichia coli (strain K12)
Q9RGG3 4.77e-25 103 31 1 229 2 sorC PTS system sorbose-specific EIIC component Lacticaseibacillus casei
P37082 1.87e-23 99 30 2 232 2 sorA PTS system sorbose-specific EIIC component Klebsiella pneumoniae
P69804 1.67e-15 77 29 1 213 3 manY PTS system mannose-specific EIIC component Shigella flexneri
P69801 1.67e-15 77 29 1 213 1 manY PTS system mannose-specific EIIC component Escherichia coli (strain K12)
P69802 1.67e-15 77 29 1 213 3 manY PTS system mannose-specific EIIC component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69803 1.67e-15 77 29 1 213 3 manY PTS system mannose-specific EIIC component Escherichia coli O157:H7
P26381 1.93e-13 71 28 0 189 4 levF Fructose permease IIC component Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10530
Feature type CDS
Gene agaW
Product PTS N-acetylgalactosamine transporter subunit IIC
Location 2316305 - 2317072 (strand: -1)
Length 768 (nucleotides) / 255 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_902
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03609 PTS system sorbose-specific iic component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3715 Carbohydrate transport and metabolism (G) G Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02746 N-acetylgalactosamine PTS system EIIC component Galactose metabolism
Metabolic pathways
Phosphotransferase system (PTS)		 -

Protein Sequence

MIFEASLVALWAFFCGIDKYDVALNIHRPLITGPVVGLIMGDMQVGLIAGATLELAWLGLVPNAGAQPPDVTLGTIAAVAFAVMTKQSPEVAMGIGMPIAVLMQMLVIGFFAMTAFTMGKADRYAEKADGAGISRLLIITLIVRSLLYALVAFVTVYFGEHAAQWIDENTPKVLLEGLGIGAKMVPAIGFAMLLKIMWSKEVAGVFFIGFVMTTYLKLPIMAVAILGASAAALYFFFSGNNKNSSQQNEDFEDGI

Flanking regions ( +/- flanking 50bp)

ATTATTTCCTGATCAAGAAAACCTGCTATAGGCAGGTTTGAGGATAATTTATGATTTTTGAAGCTTCTTTAGTGGCTTTATGGGCCTTCTTTTGCGGTATCGATAAGTACGACGTGGCATTAAATATCCATCGACCATTAATTACAGGGCCCGTTGTCGGTCTGATTATGGGAGATATGCAAGTAGGATTAATTGCAGGTGCTACCTTAGAACTTGCATGGTTAGGGCTTGTACCTAATGCCGGAGCTCAGCCACCAGATGTGACATTAGGCACCATTGCAGCAGTTGCTTTTGCGGTAATGACAAAACAATCACCGGAAGTTGCAATGGGAATAGGTATGCCTATTGCTGTTTTAATGCAGATGTTGGTGATTGGTTTCTTTGCTATGACTGCATTTACCATGGGTAAAGCGGATCGATATGCAGAAAAGGCTGACGGTGCGGGGATCTCTCGCTTGCTGATTATTACACTTATTGTCCGTTCACTCCTTTATGCTTTAGTCGCTTTTGTTACTGTTTATTTTGGTGAACATGCTGCTCAATGGATTGATGAGAACACGCCAAAAGTCTTATTAGAAGGATTAGGTATTGGGGCGAAAATGGTACCCGCAATTGGTTTTGCAATGCTTCTAAAAATTATGTGGTCAAAAGAAGTGGCCGGTGTGTTCTTTATTGGTTTCGTGATGACAACCTATCTCAAACTCCCAATTATGGCCGTCGCTATTTTAGGCGCATCAGCCGCCGCACTCTACTTCTTCTTTAGTGGTAACAATAAAAATTCAAGTCAGCAGAATGAGGATTTCGAAGATGGTATCTGATAACAGCACCGCATTGAAAACGCAGGATAAACCAGAAACAGGTTCTTTGA