COG3715


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3715, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG3715 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2492 FBDBKF_01625 18185 18982 -1 manY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component Morganella morganii S1
1 group_902 FBDBKF_04760 154028 154807 1 agaW PTS N-acetylgalactosamine transporter subunit IIC Morganella morganii S1
2 group_2492 EHELCC_02095 406005 406802 -1 manY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component Morganella morganii S2
3 group_902 EHELCC_06050 213485 214264 1 agaW PTS N-acetylgalactosamine transporter subunit IIC Morganella morganii S2
4 group_2492 NLDBIP_01365 273334 274131 1 manY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component Morganella morganii S4
5 group_902 NLDBIP_06370 254550 255329 1 agaW PTS N-acetylgalactosamine transporter subunit IIC Morganella morganii S4
6 group_2492 LHKJJB_00670 118554 119351 -1 manY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component Morganella morganii S3
7 group_902 LHKJJB_03250 232074 232853 1 agaW PTS N-acetylgalactosamine transporter subunit IIC Morganella morganii S3
8 group_2492 HKOGLL_00710 124065 124862 -1 manY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component Morganella morganii S5
9 group_902 HKOGLL_06725 153938 154717 1 agaW PTS N-acetylgalactosamine transporter subunit IIC Morganella morganii S5
10 group_2492 F4V73_RS03965 841220 842014 -1 PTS mannose/fructose/sorbose transporter subunit IIC Morganella psychrotolerans
11 group_902 F4V73_RS09230 1933639 1934418 1 agaW PTS N-acetylgalactosamine transporter subunit IIC Morganella psychrotolerans
12 group_902 PMI_RS10530 2316305 2317072 -1 agaW PTS N-acetylgalactosamine transporter subunit IIC Proteus mirabilis HI4320