COG0569


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0569, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain
Function(s) descr. Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)

Occurence in the database

COG0569 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1156 FBDBKF_06625 165942 167108 -1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S1
1 group_2369 FBDBKF_19095 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S1
2 group_1156 EHELCC_09670 166514 167680 -1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S2
3 group_2369 EHELCC_18840 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S2
4 group_1156 NLDBIP_10050 166514 167680 -1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S4
5 group_2369 NLDBIP_18855 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S4
6 group_1156 LHKJJB_07705 49558 50724 1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S3
7 group_2369 LHKJJB_18710 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S3
8 group_1156 HKOGLL_07255 49558 50724 1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S5
9 group_2369 HKOGLL_18445 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S5
10 group_1156 F4V73_RS15310 47216 48382 1 NAD-binding protein Morganella psychrotolerans
11 group_2369 F4V73_RS19070 21964 23340 -1 trkA Trk system potassium transporter TrkA Morganella psychrotolerans
12 group_1156 PMI_RS10430 2291451 2292563 -1 NAD-binding protein Proteus mirabilis HI4320
13 group_2369 PMI_RS16295 3597523 3598899 -1 trkA Trk system potassium transporter TrkA Proteus mirabilis HI4320