Homologs in group_1783

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13000 FBDBKF_13000 39.8 Morganella morganii S1 - Hemolysin
EHELCC_06315 EHELCC_06315 39.8 Morganella morganii S2 - Hemolysin
NLDBIP_06635 NLDBIP_06635 39.8 Morganella morganii S4 - Hemolysin
LHKJJB_03515 LHKJJB_03515 39.8 Morganella morganii S3 - Hemolysin
HKOGLL_06990 HKOGLL_06990 39.8 Morganella morganii S5 - Hemolysin
F4V73_RS16185 F4V73_RS16185 39.5 Morganella psychrotolerans - hemagglutinin repeat-containing protein

Distribution of the homologs in the orthogroup group_1783

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1783

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P16466 0.0 3108 98 0 1577 1 hpmA Hemolysin Proteus mirabilis
P15320 0.0 1262 44 12 1591 1 shlA Hemolysin Serratia marcescens
C4SGN7 6.21e-37 157 30 18 483 3 cdiA tRNA nuclease CdiA Yersinia mollaretii (strain ATCC 43969 / DSM 18520 / CIP 103324 / CNY 7263 / WAIP 204)
Q7CGD9 1.3e-36 156 39 9 286 3 cdiA Toxin CdiA Yersinia pestis
I1WVY3 2.19e-31 139 34 7 285 1 cdiA2 tRNA nuclease CdiA-2 Burkholderia pseudomallei (strain 1026b)
D5CBA0 6.89e-31 137 31 14 401 1 cdiA 16S rRNA endonuclease CdiA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
P0DSI1 1.38e-30 136 29 15 444 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
P0DSI1 4.55e-06 55 28 3 146 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
P0DSI1 0.000116 51 21 11 425 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
A0A1S4NYE3 6.03e-30 134 33 8 279 1 cdiA tRNA nuclease CdiA Escherichia coli (strain STEC_O31)
A0A1S4NYE3 1.86e-07 60 22 14 509 1 cdiA tRNA nuclease CdiA Escherichia coli (strain STEC_O31)
A0A1S4NYE3 3.63e-06 55 30 3 146 1 cdiA tRNA nuclease CdiA Escherichia coli (strain STEC_O31)
Q0T963 1.35e-29 133 33 8 279 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q0T963 4.25e-06 55 28 3 146 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q0T963 0.000138 50 21 11 425 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B3BM48 1.76e-28 129 35 9 259 1 cdiA1 tRNA nuclease CdiA Escherichia coli O157:H7 (strain EC869)
B3BM48 3.22e-05 52 22 14 512 1 cdiA1 tRNA nuclease CdiA Escherichia coli O157:H7 (strain EC869)
Q3YL96 3.24e-28 128 32 8 279 1 cdiA Toxin CdiA Escherichia coli
Q3YL96 6.2e-05 52 23 14 430 1 cdiA Toxin CdiA Escherichia coli
Q3YL96 0.000203 50 28 3 147 1 cdiA Toxin CdiA Escherichia coli
P12255 7.85e-27 124 30 10 296 1 fhaB Filamentous hemagglutinin Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q06277 5.29e-16 88 28 7 260 1 ibpA Protein adenylyltransferase and cysteine protease IbpA Histophilus somni (strain 2336)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10140
Feature type CDS
Gene hpmA
Product calcium-independent hemolysin HpmA
Location 2214966 - 2219699 (strand: 1)
Length 4734 (nucleotides) / 1577 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1783
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05860 TPS secretion domain
PF13332 Hemagglutinin repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3210 Intracellular trafficking, secretion, and vesicular transport (U) U Large exoprotein involved in heme utilization or adhesion

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11016 hemolysin Bacterial secretion system -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042331 calcium-independent hemolysin HpmA VF1292 Effector delivery system

Protein Sequence

MKSKNFKLSPSGRLAASLAIIFVSLNAYGNGIVPDAGHQGPDVSAVNGGTQVINIVTPNNEGISHNQYQDFNVGKPGAVFNNALEAGQSQLAGHLNANSNLNGQAASLILNEVVSRNPSFLLGQQEVFGIAAEYVLSNPNGITCDGCGFINTSRSSLVVGNPLFENGQLKGYSTLNNTNLLSLGKNGLNTTGLLDLIAPRIDSRGKITAAEISAFTGQNTFSQHFDILSSQKPVSALDSYFFGSMQSGRIRIINTAEGSGVKLAGKFTADNDLSVKADNIQTDSQVRYDSYDKDGSENYQNYRGGITVNNSGSSQTLTKTELKGKNITLVASSHNQIKASDLMGDDITLQGADLTIDGKQLQQKETDIDNRWFYSWKYDVTKEKEQIQQIGSQIDAKNNATLTATKGDVTLDAAKINAGNNLAINANKDIHINGLIEKESRSENGNKRNHTSHLESGSWSNSHQTETLKASELTAGKDLGLDAQGSITAQGAKLHANENVLVNAKDNINLNVQKTNNDKTVTDNHVMWGGIGGGQNKNNNNQQQVSHATQLTADGQLLLAADNNVNITGSQVKGNQGAFVKTTQGDVVIDNALSETISKIDERTGTAFNITKSSHKNETNKQTSTGSELISDAQLTVVSGNDVNIIGSLIKSADKLGIHSLGDINVKSAQQVTKIDDEKTSLAITGHAKEVEDKQYSAGFHITHTTNKNTSTETEQANSTISGANVDLQANKDVTFAGSDLKTTAGNASITGDNVAFVSTENKKQADNTDTTISGGFSYTGGVDKVGSKADFQYDKQHTQTEVTKNRGSQTEVAGDLTITANKDLLHEGASHHVEGRYQESGENIQHLAVNDSETSKTDSLNVGIDVGVNLDYSGVTKPVKKAIEDGVNTTKPGNNTDLTKKVTARDAIANLANLSNLETPNVGVEVGIKGGGSQKSQTDSQAVSTSINAGKINIDSNNKLHDQGTHYQSTQEGISLTANTHTSEVAQDKHQTTFHETKGGGQVGVSTKTGSDITVAIKGEGQTTDNALMETKAKGSQFTSNGDISINVGEDAHYEGAQFDAQKGKTVINAGGDLTLAQATDTHSESQSNVNGSANLKVGTTPESKDYGGGFNAGTTHHSKEQTTAKVGAITGSQGIELNAGHNLTLQGTHLSSEQDIALNATNKVDLQSASSERTEKGNNLSGGVQAGFGKKMTDDASSVNGLGSAQFAIGKQDEKSVSREGGTINNSGNLTINGNSVHLQGAQVNSKDTQLTSQSGDIEITSAQSTDYKNNWGTDIGFNGKKTNTTPKEVTEEKPATSIHNIGGKLLVNVEDQQKTSHQNATLETGTLTINSNKDLTLSGANVTADSVTGNVGGSLNIASQKESDRHVTVGVNVGYNHTNDPKSSQVNKTAKAGGSLLEKTIKDTIDSGIKSSTDAISDKYNSLSSTIADKTGISDETKAKIDQGFGKVGNGIKNIVTGAEGHTANADIKVTHVDNDAVTKTTSLTSNNDLSLNVNGSTKLTGAEIASKQGQVDLGGSSVKLENIEGHHYEAGADLGLKSSVVDLAKQLVGGDISFKSPVKTNETVNTKASISEK

Flanking regions ( +/- flanking 50bp)

TTTCATACTTATTTTGATCTACATTCATAGCAACAAATGGAGATAACTCTATGAAATCAAAAAACTTTAAACTTTCACCCTCCGGGCGACTTGCTGCGTCTTTAGCAATAATTTTTGTCTCTCTTAATGCTTATGGTAATGGCATCGTGCCCGATGCAGGCCATCAAGGGCCGGATGTCTCTGCTGTTAATGGCGGTACGCAAGTGATTAATATAGTCACGCCAAATAACGAAGGGATTTCTCATAACCAATACCAAGACTTCAATGTTGGCAAGCCTGGGGCTGTATTTAATAACGCATTAGAAGCGGGACAATCTCAACTTGCGGGTCATTTAAACGCTAACAGCAATTTAAATGGTCAAGCTGCCTCTTTAATTTTGAATGAAGTTGTTAGCCGCAACCCATCATTCTTATTAGGTCAGCAAGAGGTCTTTGGTATCGCTGCTGAATATGTGCTTTCTAACCCAAATGGTATCACATGTGATGGTTGTGGTTTTATAAATACCAGCCGCTCTTCATTAGTTGTTGGTAATCCGCTCTTTGAAAATGGTCAGCTAAAAGGCTATAGCACCCTCAACAACACCAATTTACTATCACTTGGTAAAAATGGCTTAAATACAACAGGGTTGTTAGACTTAATTGCTCCTCGTATTGATAGTAGAGGGAAAATCACTGCCGCTGAAATTTCAGCCTTTACTGGACAAAACACCTTCTCACAACATTTTGATATTCTCTCTTCACAAAAACCCGTTTCAGCATTAGATAGCTATTTCTTTGGTAGTATGCAATCGGGTCGTATCCGCATTATTAATACGGCTGAAGGTAGTGGAGTTAAATTAGCAGGTAAATTTACCGCAGATAACGACCTAAGTGTTAAAGCCGATAATATTCAAACAGATAGTCAAGTCCGTTATGACAGTTACGATAAAGATGGCAGTGAAAATTACCAAAACTATCGTGGCGGGATCACGGTTAATAATAGTGGCTCTAGTCAAACACTCACTAAAACCGAATTAAAAGGTAAAAACATCACATTAGTAGCGAGTAGCCATAATCAAATCAAAGCCTCTGATTTAATGGGGGATGATATCACGTTACAAGGCGCTGATTTAACTATCGATGGTAAACAGCTACAGCAAAAAGAGACCGATATTGATAATCGCTGGTTCTACTCGTGGAAATACGATGTGACTAAAGAGAAAGAACAAATACAGCAAATTGGTAGCCAAATTGATGCTAAAAATAATGCGACATTAACCGCAACTAAAGGAGATGTTACCTTAGACGCGGCTAAAATTAATGCGGGGAATAACCTTGCAATTAATGCCAATAAAGATATCCATATCAATGGATTAATTGAGAAAGAAAGTCGTAGTGAAAATGGCAATAAACGTAACCATACTTCTCACTTAGAAAGTGGTAGTTGGAGTAATAGCCACCAAACTGAGACGTTAAAAGCCAGTGAATTAACGGCAGGTAAAGATCTTGGTTTAGATGCTCAAGGCTCAATAACGGCGCAAGGTGCTAAACTGCATGCGAATGAAAATGTGCTGGTCAATGCCAAAGATAACATTAATTTAAACGTCCAAAAAACCAATAATGATAAAACAGTCACCGATAATCATGTTATGTGGGGAGGTATTGGTGGTGGTCAGAATAAAAATAATAATAATCAACAACAAGTTAGTCATGCAACACAATTAACCGCTGATGGTCAATTGCTCCTTGCTGCAGATAACAATGTCAACATTACCGGTAGCCAAGTAAAAGGCAACCAAGGTGCTTTTGTTAAAACCACACAAGGTGATGTCGTCATTGATAATGCGCTGAGTGAAACCATCAGTAAAATCGATGAACGCACAGGAACCGCGTTTAATATCACTAAAAGTTCACATAAAAATGAAACTAATAAACAAACATCTACAGGTAGTGAACTCATTTCCGATGCACAATTGACCGTTGTCAGTGGCAATGATGTTAATATCATTGGTAGTTTAATCAAAAGTGCTGATAAATTAGGTATTCATTCTTTAGGTGATATCAACGTTAAATCAGCACAACAAGTCACTAAGATTGATGATGAAAAAACATCATTAGCCATTACTGGGCACGCCAAAGAAGTTGAAGACAAGCAATATAGTGCGGGCTTTCATATCACTCATACCACCAATAAAAATACTAGTACTGAAACAGAGCAAGCTAACTCAACCATTAGTGGTGCCAATGTTGATCTGCAAGCGAATAAAGATGTGACTTTTGCGGGATCTGATCTAAAGACTACCGCAGGGAATGCCTCTATTACGGGTGATAATGTTGCCTTTGTTAGTACGGAAAATAAAAAACAAGCGGACAACACAGATACCACTATTTCAGGGGGTTTTAGCTACACAGGAGGTGTAGATAAAGTCGGTTCTAAAGCCGATTTTCAATATGACAAACAACATACACAAACAGAGGTAACAAAAAATAGAGGCAGCCAAACAGAGGTTGCAGGTGATTTGACTATTACCGCGAACAAAGATTTGCTTCACGAAGGGGCTTCTCACCATGTTGAGGGGCGTTATCAAGAGTCTGGTGAAAATATTCAGCATCTTGCCGTCAATGATAGTGAAACATCTAAAACTGACAGCTTAAATGTTGGTATCGATGTTGGCGTTAATCTTGATTATAGCGGTGTAACGAAGCCAGTTAAGAAAGCAATCGAAGATGGTGTTAACACAACCAAACCGGGTAACAATACCGATTTAACTAAAAAAGTTACAGCAAGAGATGCAATTGCTAATTTAGCTAACCTTAGCAATTTAGAGACCCCCAATGTCGGTGTTGAAGTTGGTATTAAAGGTGGTGGTAGTCAGAAATCACAAACCGATAGCCAAGCCGTTTCAACCTCTATCAATGCAGGAAAAATCAACATTGATAGTAATAATAAGTTACATGATCAAGGTACTCACTATCAATCAACCCAAGAAGGTATTTCTCTCACAGCAAACACCCACACAAGTGAGGTCGCGCAAGATAAACATCAAACGACATTCCATGAAACAAAAGGCGGTGGACAAGTTGGTGTCAGTACTAAAACGGGCAGTGATATTACCGTTGCTATTAAAGGTGAAGGCCAAACAACTGATAACGCCTTAATGGAAACAAAGGCTAAAGGTAGCCAATTTACCTCAAATGGCGATATTTCGATTAATGTAGGTGAAGATGCCCATTATGAAGGTGCTCAATTTGATGCACAAAAGGGCAAAACAGTTATCAATGCGGGGGGTGATCTCACTCTTGCACAGGCGACTGATACTCATAGCGAAAGTCAATCTAATGTTAATGGTAGTGCAAATCTGAAAGTGGGCACCACGCCAGAGAGTAAAGACTATGGTGGAGGTTTCAATGCAGGGACAACTCATCACAGCAAAGAGCAGACTACCGCAAAAGTGGGCGCTATCACTGGCTCTCAAGGTATTGAATTAAACGCTGGGCATAACCTGACTTTACAAGGTACTCATTTAAGTAGCGAACAAGATATTGCATTAAATGCAACTAATAAAGTCGACCTACAATCAGCGAGCTCTGAGCGTACTGAAAAAGGCAATAATTTATCTGGAGGAGTACAAGCAGGTTTTGGTAAAAAAATGACCGATGATGCTTCATCTGTGAATGGTTTAGGTAGTGCCCAATTTGCTATTGGTAAACAAGATGAGAAAAGCGTATCTCGAGAAGGAGGAACGATTAATAACTCAGGAAACTTAACGATTAATGGCAATAGCGTCCATCTTCAAGGAGCACAAGTTAATAGTAAAGATACTCAGCTAACATCACAATCCGGTGATATCGAGATCACATCTGCGCAGTCTACTGATTATAAAAACAATTGGGGAACAGATATTGGCTTTAATGGCAAAAAAACCAATACCACCCCAAAAGAAGTTACAGAGGAGAAACCTGCTACCTCTATTCATAACATAGGGGGTAAATTACTGGTTAATGTGGAAGATCAACAAAAAACGAGCCACCAAAATGCAACCTTAGAAACAGGTACATTAACGATTAATAGTAATAAAGATCTGACACTATCTGGTGCTAATGTGACTGCTGATAGCGTTACGGGTAATGTTGGTGGTTCACTCAATATTGCTAGCCAAAAAGAGAGTGATCGCCATGTCACTGTTGGCGTCAATGTTGGCTATAACCACACCAATGATCCTAAATCAAGCCAAGTGAATAAAACGGCTAAAGCCGGAGGGTCATTATTAGAGAAAACTATCAAAGATACGATTGATTCAGGAATTAAATCATCAACCGATGCTATCTCTGATAAATACAATTCCCTCTCTTCAACTATTGCAGATAAAACAGGTATCAGTGATGAAACTAAAGCCAAAATTGATCAAGGTTTTGGTAAAGTTGGTAATGGTATTAAGAATATCGTCACAGGTGCTGAAGGTCATACTGCTAATGCAGATATCAAAGTCACTCATGTAGATAATGATGCTGTCACTAAAACCACCTCCTTAACTAGCAACAACGACCTATCATTAAATGTGAATGGCTCGACAAAACTCACCGGAGCAGAAATTGCGAGTAAACAAGGCCAAGTTGATTTAGGGGGAAGTAGCGTTAAATTAGAAAATATTGAAGGACATCATTATGAAGCCGGCGCTGATCTTGGTCTGAAATCCTCTGTGGTGGATTTAGCAAAACAACTGGTAGGTGGAGATATTTCTTTTAAATCCCCCGTTAAAACGAATGAAACCGTCAATACAAAAGCATCTATTTCTGAAAAATAGTCGATACTTCATAAAAGAGTAACTGCCTATTTTTTGTAAGCTAAGCCCAC