COG3210


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3210, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Large exoprotein involved in heme utilization or adhesion
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG3210 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_25 FBDBKF_09475 122348 132379 -1 Big-1 domain-containing protein Morganella morganii S1
1 group_25 FBDBKF_09485 134164 140745 -1 Big-1 domain-containing protein Morganella morganii S1
2 group_1783 FBDBKF_13000 100290 104924 -1 Hemolysin Morganella morganii S1
3 group_1783 EHELCC_06315 270322 274956 -1 Hemolysin Morganella morganii S2
4 group_25 EHELCC_09925 5359 11940 1 Big-1 domain-containing protein Morganella morganii S2
5 group_25 EHELCC_09935 13725 23756 1 Big-1 domain-containing protein Morganella morganii S2
6 group_1783 NLDBIP_06635 311387 316021 -1 Hemolysin Morganella morganii S4
7 group_25 NLDBIP_19245 5357 11938 1 Big-1 domain-containing protein Morganella morganii S4
8 group_25 NLDBIP_19255 13723 21948 1 Big-1 domain-containing protein Morganella morganii S4
9 group_1783 LHKJJB_03515 288911 293545 -1 Hemolysin Morganella morganii S3
10 group_25 LHKJJB_19115 121 8346 -1 Big-1 domain-containing protein Morganella morganii S3
11 group_25 LHKJJB_19125 10131 16712 -1 Big-1 domain-containing protein Morganella morganii S3
12 group_1783 HKOGLL_06990 210775 215409 -1 Hemolysin Morganella morganii S5
13 group_25 HKOGLL_18895 121 8346 -1 Big-1 domain-containing protein Morganella morganii S5
14 group_25 HKOGLL_18905 10131 16712 -1 Big-1 domain-containing protein Morganella morganii S5
15 group_25 F4V73_RS10495 216304 222888 1 invasin domain 3-containing protein Morganella psychrotolerans
16 group_25 F4V73_RS10505 224824 234594 1 Ig-like domain-containing protein Morganella psychrotolerans
17 group_3725 F4V73_RS12075 569289 573139 1 inverse autotransporter beta domain-containing protein Morganella psychrotolerans
18 group_3732 F4V73_RS12495 82783 90567 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
19 group_1783 F4V73_RS16185 40653 45293 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
20 group_1783 PMI_RS10140 2214966 2219699 1 hpmA calcium-independent hemolysin HpmA Proteus mirabilis HI4320