Homologs in group_840

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04235 FBDBKF_04235 85.3 Morganella morganii S1 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
EHELCC_05525 EHELCC_05525 85.3 Morganella morganii S2 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
NLDBIP_05845 NLDBIP_05845 85.3 Morganella morganii S4 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
LHKJJB_02725 LHKJJB_02725 85.3 Morganella morganii S3 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
HKOGLL_06200 HKOGLL_06200 85.3 Morganella morganii S5 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
F4V73_RS08685 F4V73_RS08685 84.3 Morganella psychrotolerans aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type

Distribution of the homologs in the orthogroup group_840

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_840

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFG8 0.0 1637 86 1 888 1 aceE Pyruvate dehydrogenase E1 component Escherichia coli (strain K12)
P0AFG9 0.0 1637 86 1 888 1 aceE Pyruvate dehydrogenase E1 component Escherichia coli O157:H7
P57301 0.0 1404 74 1 888 3 aceE Pyruvate dehydrogenase E1 component Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9T9 0.0 1386 73 2 889 3 aceE Pyruvate dehydrogenase E1 component Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AR0 0.0 1322 69 1 888 3 aceE Pyruvate dehydrogenase E1 component Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P45119 0.0 1319 68 4 890 3 aceE Pyruvate dehydrogenase E1 component Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q59637 0.0 1108 59 7 883 3 aceE Pyruvate dehydrogenase E1 component Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q59097 0.0 1108 59 10 885 3 pdhA Pyruvate dehydrogenase E1 component Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
A0R0B0 0.0 936 52 9 883 1 aceE Pyruvate dehydrogenase E1 component Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P9WIS9 0.0 922 51 10 890 1 aceE Pyruvate dehydrogenase E1 component Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIS8 0.0 922 51 10 890 3 aceE Pyruvate dehydrogenase E1 component Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8NNF6 0.0 916 50 9 884 1 aceE Pyruvate dehydrogenase E1 component Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q2NKZ4 3.32e-09 64 34 5 162 2 TKTL2 Transketolase-like protein 2 Bos taurus
Q6B855 5.3e-09 63 28 11 293 2 TKT Transketolase Bos taurus
P29401 1.83e-08 62 33 5 164 1 TKT Transketolase Homo sapiens
Q5R1W6 1.97e-08 61 33 5 164 2 TKT Transketolase Pan troglodytes
Q9D4D4 2.44e-08 61 30 9 232 1 Tktl2 Transketolase-like protein 2 Mus musculus
Q60HC7 2.49e-08 61 33 5 164 2 TKT Transketolase Macaca fascicularis
Q5R4C1 5.63e-08 60 33 5 164 2 TKT Transketolase Pongo abelii
Q9H0I9 6.48e-08 60 31 5 169 1 TKTL2 Transketolase-like protein 2 Homo sapiens
P40142 9.58e-08 59 33 5 164 1 Tkt Transketolase Mus musculus
P50137 1.02e-07 59 33 5 164 1 Tkt Transketolase Rattus norvegicus
P10801 2.07e-07 51 57 0 42 4 None Pyruvate dehydrogenase E1 component (Fragment) Azotobacter vinelandii
D5AV94 4.68e-07 57 28 8 224 3 tktA Transketolase Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P0CZ16 4.8e-07 57 28 8 224 3 tktA Transketolase Rhodobacter capsulatus
P21725 2.74e-05 51 29 6 224 3 cbbTC Transketolase, chromosomal Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q58094 5.64e-05 49 27 5 221 5 MJ0681 Putative transketolase N-terminal section Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P21726 7.02e-05 50 28 6 219 3 cbbTP Transketolase, plasmid Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q5XAK5 0.000104 49 27 6 198 1 tkt Transketolase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8NZX4 0.000107 49 27 6 198 3 tkt Transketolase Streptococcus pyogenes serotype M18 (strain MGAS8232)
P57927 0.000192 48 27 8 243 3 tktA Transketolase 1 Pasteurella multocida (strain Pm70)
P57958 0.000197 48 27 8 243 3 tktB Transketolase 2 Pasteurella multocida (strain Pm70)
P51010 0.00023 48 26 7 220 3 tkt Transketolase 1 Xanthobacter flavus
Q9URM2 0.000311 48 29 8 172 2 SPBC2G5.05 Probable transketolase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P43757 0.000652 47 26 9 267 1 tktA Transketolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10085
Feature type CDS
Gene aceE
Product pyruvate dehydrogenase (acetyl-transferring), homodimeric type
Location 2202665 - 2205331 (strand: -1)
Length 2667 (nucleotides) / 888 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_840
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00456 Transketolase, thiamine diphosphate binding domain
PF17831 Pyruvate dehydrogenase E1 component middle domain
PF22613 Transketolase-like TK C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2609 Energy production and conversion (C) C Pyruvate dehydrogenase complex, dehydrogenase (E1) component

Kegg Ortholog Annotation(s)

Protein Sequence

MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA

Flanking regions ( +/- flanking 50bp)

AGATAGGCTCCTATAACCATTAGAAACAGATAACAGATAAGGAATACACCATGTCAGATATGCTGAAAAATGACGTGGATCCGATCGAAACTCGCGATTGGTTACAAGCGATCGACTCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCACAGTTCCTGATTGATCAGGTATTAAAACAAGCCCGTAATGGCGGTCTTGATATTGCTTTAGGTGGCTCTGTACACAGTGATTATATCAATACTATTCCTGTTGAAGATGAACCCGCTTACCCTGGCAATCTGGAATTGGAACGTCGTATCCGTTCTGCTATTCGCTGGAACGCAGTAATGATGGTTCTGCGCGCGTCCAAAAAAGATTTGGAACTCGGCGGGCACATGGCGTCATACCAGTCTTCTGCAACTTTATATGAAGTTTGCTTTAACCACTTCTTCCGTGCTCATAATGACAATGATGGCGGTGACTTAGTTTACTTCCAAGGTCATATCTCTCCGGGGATCTACGCACGTGCATTCTTAGAAGGGCGTCTGACTGAAGAGCAATTAAATAACTTCCGTCAAGAAATTGGTGGTAAAGGTTTATCCTCTTATCCACACCCTAAATTAATGCCTGAATTCTGGCAGTTCCCAACCGTTTCAATGGGCTTGGGGCCACTATCTGCGATTTATCAAGCAAAATTCTTGAAATATTTAGATCACCGTGGCTTAAAAGATACCACTAAGCAACGTGTTTATGCGTTCTTAGGTGATGGTGAAATGGACGAGCCAGAATCTAAAGGTGCTATCACTATCGCTGTACGCGAAAAATTAGATAACTTGTGCTTCGTGGTTAACTGTAACTTACAGCGTCTTGATGGCCCAGTTACAGGTAACGGCAAAATTGTTAACGAATTAGAAGGTATCTTCGCCGGTGCTGGCTGGAATGTGATCAAAGTGATGTGGGGCGACCGTTGGGATGCACTACTACGTAAAGACACTTCCGGTAAACTGATCCAGTTAATGAATGAAACACTGGATGGTGACTACCAGACTTTCAAATCTCGCGACGGTGCTTATGTTCGTGAGCATTTCTTCAATCGTTACCCAGAAACTGCCGCATTAGTTAAAGATATGACTGATGACGAAATTTGGGCGTTAAACCGTGGTGGTCACGATCCGAAGAAAGTTTTTGCGGCATTCCAAAAAGCCAAAGAAACCAAAGATAAACCAACCGTTATTTTAGCTCAGACCATCAAAGGTTATGGTATGGGTGAAACGGCAGAAGGTAAAAACATCGCTCACCAAGTGAAAAAAATGAACATGGACGGTGTGAAACATTTCCGTGATCGTTTCAATATCCCTGTTAGCGATGAGAAAGTAGCAGAACTGCCTTATATCACTTTTGATAAAGATTCAGAAGAGTACAAATATCTGCATGCTCGCCGTCAGGAACTAGAAGGTTACTTACCTGCTCGTCGTACTCGTTTTGATGAAAAATTAGAAATTCCTACACTGGAAGATTTCAGCCAGTTATTAGAAGAACAATCTAAAGAGATTTCTACTACTATCGCATTCGTTCGTGCGTTGAACGTAATGTTGAAAAACAAATCTATTAAAGATCGTTTAGTCCCTATTATTGCTGATGAAGCACGTACTTTCGGTATGGAAGGTCTGTTCCGTCAAATCGGTATCTACAGCCCGAATGGCCAGCAATATACGCCTCAAGATCGTGAGCAAGTTGCTTACTATAAAGAAGACGTTAAAGGTCAGATCCTGCAAGAAGGTATTAACGAACTGGGTGCGGGTGCATCTTGGTTAGCGGCTGCAACATCTTACAGCACTAACAACTTGCCAATGATCCCATTCTATATCTACTACTCAATGTTTGGTTTCCAACGTATTGGTGACCTATGTTGGGCTGCGGGTGACCAACAAGCACGCGGTTTCTTAATTGGTGGTACTTCAGGTCGTACAACGCTAAACGGTGAAGGTTTACAACACGAAGATGGTCATAGCCATATTCAATCACTGACTATTCCTAACTGTATCTCTTACGATCCGGCCTTCGCGTATGAAGTTGCTGTCATTATGCAAGATGGTTTAGAGCGTATGTATGGTGATAAACAAGAAAACGTTTATTACTACATCACAACGTTAAACGAAAACTATCATATGCCAGCAATGCCAGCTGGAGCAGAAGAGGGTATCCGTAAAGGTATCTATAAACTGGAATCTCTGGAAGGCGCGAAAGGTAAAGTTCAGTTACTGGGTTCTGGCTCTATTTTACGTCACGTACGTGAAGCAGCACAAATTCTGTCAACTGAATATGGTATTGGTTCCGATGTGTACAGTGTAACATCATTCACTGAATTGGCTCGTGATGGTCAAGATTGTGAACGTTGGAACATGCTACATCCATCAGAAGAGCCTCGTGTACCATACATTGCTCAAATCATGAATGATGCACCCGCTGTTGCTTCAACAGACTATATGAAACTGTTTGCAGAACAAGTTCGCACTTATGTGCCAGCTGACGACTATCGTGTCTTAGGTACAGATGGTTTCGGTCGTTCAGATAGCCGTGAAAATCTGCGTCACCACTTTGAAGTTGATACTTCTTATGTGATTGTTGCTGCATTAGGCGAATTAGCTAAACGTGGTGAGATTGATGTGAAGGTTGTTGAAGAAGCAATCAAAAAATACAACATCAACCCTGAAAAAGTAAACCCACGTCTGGCGTAAGAGGTAAAGTGAATGTCTATTGAAATTAAAGTCCCTGATATCGGTGCAGA