Homologs in group_1646

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10935 FBDBKF_10935 20.6 Morganella morganii S1 exsD T3SS regulon anti-activator ExsD family protein
EHELCC_05290 EHELCC_05290 20.6 Morganella morganii S2 exsD T3SS regulon anti-activator ExsD family protein
NLDBIP_05610 NLDBIP_05610 20.6 Morganella morganii S4 exsD T3SS regulon anti-activator ExsD family protein
LHKJJB_02490 LHKJJB_02490 20.6 Morganella morganii S3 exsD T3SS regulon anti-activator ExsD family protein
HKOGLL_15870 HKOGLL_15870 20.6 Morganella morganii S5 exsD T3SS regulon anti-activator ExsD family protein
F4V73_RS08360 F4V73_RS08360 21.5 Morganella psychrotolerans - T3SS regulon anti-activator ExsD family protein

Distribution of the homologs in the orthogroup group_1646

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1646

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9I321 2.82e-07 54 21 6 247 1 exsD Transcriptional antiactivator ExsD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09675
Feature type CDS
Gene -
Product T3SS regulon anti-activator ExsD family protein
Location 2110477 - 2111322 (strand: 1)
Length 846 (nucleotides) / 281 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1646
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF16806 Antiactivator protein ExsD N-terminal domain

Protein Sequence

MIKRQTNTSKYQYYRYFNLLKKMMADENKKTVDNLFNLQFSLLITNNDINEKQIKILSRLLCREAVDSLLQSTWFLRKKHCSVPLTKENINAVVNLADKYQSNISDINWNALNAKINIADHARFIQAIIKPIFIWWVEHITPHIFTLYEIKKELEYQINQCENIKLFEEKEPSNIASSFLSLEDIKTKLEADKARFVVIDDLLKKDIKLVIEAWEKEPVFNKKINNTLEYLQNTQPHSELLQPLWDILITIPQHPENCKKLKHWLVEHSLCLINDEFMWHV

Flanking regions ( +/- flanking 50bp)

TCAATTCATCGCTAGAATATGCAAAATTTGTTCTGATGAGTGAAACTATTGTGATAAAGCGACAAACTAATACTAGCAAATACCAATATTATCGTTATTTTAATTTGCTAAAAAAAATGATGGCAGATGAAAATAAGAAAACTGTTGATAATTTATTTAATCTTCAGTTTTCTTTACTTATTACAAATAATGATATAAATGAGAAACAAATTAAAATATTATCTCGTTTATTATGCCGTGAAGCTGTAGACAGTTTATTGCAATCCACATGGTTTTTACGCAAAAAACATTGCTCAGTGCCATTAACTAAAGAAAATATTAATGCCGTAGTAAATTTGGCTGATAAATACCAATCTAATATATCAGATATTAATTGGAACGCTTTAAATGCAAAAATCAACATTGCTGATCATGCACGTTTTATTCAAGCTATCATAAAACCTATTTTTATTTGGTGGGTTGAACATATAACACCGCATATATTTACACTTTATGAGATAAAAAAAGAGCTCGAATATCAAATTAATCAATGTGAAAACATTAAATTATTTGAAGAAAAGGAACCATCAAATATAGCCTCTTCTTTTTTATCTTTAGAAGATATAAAAACAAAATTAGAAGCTGATAAAGCACGGTTCGTCGTGATAGATGATTTGTTGAAAAAGGATATTAAATTAGTTATAGAAGCTTGGGAAAAAGAGCCGGTATTCAATAAAAAAATAAATAATACATTAGAGTACTTACAAAATACACAACCGCATTCTGAGTTATTACAACCATTATGGGATATTTTAATCACTATTCCACAACACCCTGAAAATTGTAAAAAACTAAAACACTGGCTAGTAGAACACTCTTTATGTTTAATTAATGATGAATTTATGTGGCATGTATAAAATATCAGCTCTTCATTATTTATAGAAGAGCTGACAACGGTAATTTATTA