Homologs in group_1688

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_05290 EHELCC_05290 100.0 Morganella morganii S2 exsD T3SS regulon anti-activator ExsD family protein
NLDBIP_05610 NLDBIP_05610 100.0 Morganella morganii S4 exsD T3SS regulon anti-activator ExsD family protein
LHKJJB_02490 LHKJJB_02490 100.0 Morganella morganii S3 exsD T3SS regulon anti-activator ExsD family protein
HKOGLL_15870 HKOGLL_15870 100.0 Morganella morganii S5 exsD T3SS regulon anti-activator ExsD family protein
F4V73_RS08360 F4V73_RS08360 41.8 Morganella psychrotolerans - T3SS regulon anti-activator ExsD family protein
PMI_RS09675 PMI_RS09675 20.6 Proteus mirabilis HI4320 - T3SS regulon anti-activator ExsD family protein

Distribution of the homologs in the orthogroup group_1688

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1688

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9I321 0.000625 43 20 6 231 1 exsD Transcriptional antiactivator ExsD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_10935
Feature type CDS
Gene exsD
Product T3SS regulon anti-activator ExsD family protein
Location 12443 - 13177 (strand: -1)
Length 735 (nucleotides) / 244 (amino acids)
In genomic island -

Contig

Accession contig_13
Length 135581 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1688
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MLNKTMYHLYLSDDRIYNSEDACKENDLLSEYLTRQQADNLKTTDWFRRRKKWNIPFQYHDLTMIRQTIQTYPDNWDACLSDTIILSASRYWIDGLLNETYEYWIKDTHRELWDLEEEYNQRRIINRQLAALHALYSAYYPQTEQSELSDIKNSFAESAQDLSRTEHNIHTLRGEISFTLRHFVNLFRDVIYHHKSLQDNRIPDYFRTAVQLILQLKNNNDDDRLYQWLNSRNICLTTDKIHWC

Flanking regions ( +/- flanking 50bp)

GTCTGTTAAGCTGCGTTCCTTTGCTTCACTTTTATTCGCCAGAGGGATTCATGCTTAATAAAACGATGTATCATCTTTATCTGTCAGATGATCGAATATATAACTCAGAAGACGCCTGTAAAGAAAATGATTTATTATCTGAATATCTTACACGTCAGCAGGCAGACAACTTAAAAACAACAGATTGGTTCCGCCGCAGAAAGAAATGGAATATTCCTTTTCAGTATCATGACCTGACCATGATCAGACAGACAATACAGACTTACCCTGATAACTGGGATGCCTGTTTGTCTGACACAATTATATTATCTGCGTCCCGTTACTGGATTGACGGATTATTAAACGAAACGTATGAATACTGGATAAAAGACACACACCGTGAGCTGTGGGATCTGGAAGAAGAATATAATCAACGCAGAATAATAAACCGTCAGCTGGCTGCCCTGCATGCGCTGTACAGTGCATATTATCCGCAGACGGAGCAGTCAGAGCTGTCAGATATCAAAAACAGTTTCGCGGAGTCCGCACAGGATCTTTCCCGGACAGAGCATAATATTCACACTCTCCGGGGAGAAATTTCGTTCACGCTGCGTCATTTTGTTAATCTGTTCCGTGATGTGATTTATCATCATAAGTCCTTGCAGGACAACCGTATTCCGGACTATTTCCGTACTGCCGTACAGCTGATTTTGCAGCTGAAAAACAACAATGACGACGACCGGCTGTATCAGTGGCTGAACAGCCGCAATATCTGTCTGACGACAGATAAAATACACTGGTGCTGACAGCACCGGCAAATATACCGGATAAAGGGATAGCAATATCCCTTTTATCT