Homologs in group_1646

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10935 FBDBKF_10935 41.8 Morganella morganii S1 exsD T3SS regulon anti-activator ExsD family protein
EHELCC_05290 EHELCC_05290 41.8 Morganella morganii S2 exsD T3SS regulon anti-activator ExsD family protein
NLDBIP_05610 NLDBIP_05610 41.8 Morganella morganii S4 exsD T3SS regulon anti-activator ExsD family protein
LHKJJB_02490 LHKJJB_02490 41.8 Morganella morganii S3 exsD T3SS regulon anti-activator ExsD family protein
HKOGLL_15870 HKOGLL_15870 41.8 Morganella morganii S5 exsD T3SS regulon anti-activator ExsD family protein
PMI_RS09675 PMI_RS09675 21.5 Proteus mirabilis HI4320 - T3SS regulon anti-activator ExsD family protein

Distribution of the homologs in the orthogroup group_1646

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1646

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08360
Feature type CDS
Gene -
Product T3SS regulon anti-activator ExsD family protein
Location 1731417 - 1732151 (strand: 1)
Length 735 (nucleotides) / 244 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1646
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MLNKTKDAVFLSDNEIHIFNELYDENYLLSKYICRENIDALKITPWFKRKKKWKIPFKYNDLTMIRNAIRHHPDNWVDYLADTILLSESRYWTDWLITETYEYWLNNNYGDLNALKNQHQKYDTVRNQLSALIMLYTKNRALTGDDMITQTERKLADCNDNLSRLKMDIDKFNQSVPFTQRDFYDAFRAAIYHNNVLQHSAVPEELQTVIDSILLLKENNNNEFLHKWLYQRNICLQGDILRWH

Flanking regions ( +/- flanking 50bp)

TTCTGCTAGGCTACCCTTTTGATATACTTTATATCTGACCAGAGGGAATTATGCTTAATAAAACTAAAGATGCTGTATTTTTGTCCGATAATGAAATCCATATATTTAATGAACTATACGATGAAAACTATTTATTATCAAAATACATTTGTCGTGAAAATATAGATGCGTTAAAAATAACACCGTGGTTTAAGCGAAAGAAAAAATGGAAAATACCATTCAAATATAATGATTTAACCATGATAAGAAACGCCATACGTCACCATCCGGATAATTGGGTAGATTACCTCGCTGATACTATCCTGTTATCTGAATCACGTTATTGGACTGACTGGCTGATTACAGAAACCTATGAATACTGGTTGAATAATAACTATGGTGATTTAAATGCATTAAAAAACCAGCATCAAAAATATGATACCGTACGTAATCAGTTGTCTGCTTTAATAATGCTTTATACAAAAAACAGAGCATTAACGGGAGACGATATGATCACGCAAACGGAACGGAAATTAGCTGACTGCAACGATAATTTGTCTCGTCTTAAAATGGATATAGATAAATTTAATCAGTCGGTTCCGTTTACTCAGCGTGATTTTTATGATGCATTTCGTGCGGCTATTTATCACAACAATGTACTGCAACATTCCGCTGTTCCGGAAGAGTTACAAACAGTTATTGATTCCATTCTGTTACTGAAAGAAAATAATAATAATGAATTTTTGCATAAATGGTTGTATCAGAGAAATATCTGCCTGCAAGGTGACATATTGCGCTGGCACTGATTTCATCCGGAAAAAGAATTATCTGACAGGGCGTTATTTAGCAGGGATAG