Homologs in group_590

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01065 FBDBKF_01065 36.0 Morganella morganii S1 pilF Type IV pilus assembly protein PilF/PilW
EHELCC_00480 EHELCC_00480 36.0 Morganella morganii S2 pilF Type IV pilus assembly protein PilF/PilW
NLDBIP_02980 NLDBIP_02980 36.0 Morganella morganii S4 pilF Type IV pilus assembly protein PilF/PilW
LHKJJB_04495 LHKJJB_04495 36.0 Morganella morganii S3 pilF Type IV pilus assembly protein PilF/PilW
HKOGLL_02550 HKOGLL_02550 36.0 Morganella morganii S5 pilF Type IV pilus assembly protein PilF/PilW
F4V73_RS07140 F4V73_RS07140 35.1 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_590

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_590

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9HXJ2 0.000362 42 28 2 117 1 pilF Type IV pilus assembly protein PilF Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09115
Feature type CDS
Gene -
Product hypothetical protein
Location 1984781 - 1985215 (strand: -1)
Length 435 (nucleotides) / 144 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_590
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3914 Posttranslational modification, protein turnover, chaperones (O) O Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Protein Sequence

MIRMSSKVVAICLVLLTIGCQSTANKKHVAVPLRLQLGEAYLAEQQYQIAQYHFQKVLSVMPEHPEANLGMALTSQLLGNPIQALDYYKLAMKSKPVNVNVLRFYGNFLCEQNLLNNNNVLIEDIPSDYLVCQHAEYQKSPNSR

Flanking regions ( +/- flanking 50bp)

TAAAACAAAGTAGAGAGTTGCAAGAATGGATTAATTTAAGGAAGATAACGATGATAAGGATGTCATCAAAGGTTGTTGCTATCTGCTTGGTGTTATTGACAATAGGCTGCCAATCAACAGCAAATAAAAAACATGTTGCAGTGCCTCTTCGTCTTCAATTAGGGGAAGCTTATCTGGCTGAGCAACAATATCAGATAGCCCAATATCATTTTCAAAAAGTGCTGTCAGTGATGCCTGAGCATCCTGAAGCAAATTTAGGAATGGCATTAACATCCCAGTTATTGGGAAATCCTATTCAGGCGCTAGATTATTACAAATTAGCGATGAAGTCGAAGCCAGTAAATGTTAATGTATTAAGGTTTTATGGTAATTTCCTTTGTGAACAAAATTTATTAAACAACAATAATGTGTTAATTGAGGATATACCGTCAGATTATTTGGTTTGTCAGCATGCTGAATACCAAAAATCACCAAATTCGCGATGAGGACGTTAAAAACTGTATTTTCTCGTGTTCATCAATGTTAAACATCCAAT