Homologs in group_1925

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14325 FBDBKF_14325 64.4 Morganella morganii S1 yfcL YfcL protein
EHELCC_07955 EHELCC_07955 64.4 Morganella morganii S2 yfcL YfcL protein
NLDBIP_08280 NLDBIP_08280 64.4 Morganella morganii S4 yfcL YfcL protein
LHKJJB_05985 LHKJJB_05985 64.4 Morganella morganii S3 yfcL YfcL protein
HKOGLL_04930 HKOGLL_04930 64.4 Morganella morganii S5 yfcL YfcL protein
F4V73_RS02580 F4V73_RS02580 63.3 Morganella psychrotolerans - YfcL family protein

Distribution of the homologs in the orthogroup group_1925

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1925

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64540 1.29e-26 96 52 0 87 4 yfcL Uncharacterized protein YfcL Escherichia coli (strain K12)
P64541 1.29e-26 96 52 0 87 4 yfcL Uncharacterized protein YfcL Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08820
Feature type CDS
Gene -
Product YfcL family protein
Location 1929978 - 1930250 (strand: -1)
Length 273 (nucleotides) / 90 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1925
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08891 YfcL protein

Protein Sequence

MLSEYETYLLDKIDSRVEHATDDELFAGGYLQGHITLAIAELEQENNTQLSALKSRVEESIQKAIKAGELSPPDQILVLSTWHDLVNSIN

Flanking regions ( +/- flanking 50bp)

ACATCGAGTGACTTAAATCTGATAGCAACATTATATATTGAGGATAAATAATGCTTTCTGAGTATGAAACGTACTTATTAGATAAAATTGATAGCCGTGTTGAACATGCTACGGATGATGAATTATTTGCTGGTGGATATTTACAAGGCCACATCACTTTAGCGATTGCGGAGCTTGAGCAAGAAAACAATACGCAATTATCAGCATTAAAATCCCGTGTAGAAGAGAGCATTCAAAAAGCTATCAAAGCAGGAGAGCTTTCTCCTCCTGATCAAATATTGGTTTTATCGACGTGGCATGATTTAGTTAACTCGATTAATTAGTATAAATAACCTATATTGAGAACAACCGATACTATCGGTTGTTTTTCTTT