Homologs in group_1925

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14325 FBDBKF_14325 89.2 Morganella morganii S1 yfcL YfcL protein
EHELCC_07955 EHELCC_07955 89.2 Morganella morganii S2 yfcL YfcL protein
NLDBIP_08280 NLDBIP_08280 89.2 Morganella morganii S4 yfcL YfcL protein
LHKJJB_05985 LHKJJB_05985 89.2 Morganella morganii S3 yfcL YfcL protein
HKOGLL_04930 HKOGLL_04930 89.2 Morganella morganii S5 yfcL YfcL protein
PMI_RS08820 PMI_RS08820 63.3 Proteus mirabilis HI4320 - YfcL family protein

Distribution of the homologs in the orthogroup group_1925

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1925

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64540 3.46e-33 113 56 0 92 4 yfcL Uncharacterized protein YfcL Escherichia coli (strain K12)
P64541 3.46e-33 113 56 0 92 4 yfcL Uncharacterized protein YfcL Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02580
Feature type CDS
Gene -
Product YfcL family protein
Location 544337 - 544618 (strand: 1)
Length 282 (nucleotides) / 93 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1925
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08891 YfcL protein

Protein Sequence

MLADYETRILAQIDDMVEHATDDELFAGGYLQGHLTLAVAELEQSGEHTVEALHDKVEMSIRQAIKAGELTPPDQVLVLETWQRLLKNAQAQK

Flanking regions ( +/- flanking 50bp)

GTTTGCCTGACAAACTGATGTTGCGGACGACTGAACTCTAAGGAATAAACATGCTTGCGGATTATGAAACACGTATCCTCGCTCAGATTGATGACATGGTTGAACATGCCACTGATGATGAGTTGTTTGCAGGAGGTTATTTACAGGGGCATCTGACCCTGGCGGTAGCGGAACTGGAACAAAGCGGGGAGCACACTGTTGAGGCGCTGCACGATAAAGTAGAGATGAGCATCCGTCAGGCGATTAAAGCCGGTGAACTGACACCGCCGGATCAGGTGCTGGTACTTGAAACCTGGCAGCGTTTGCTGAAAAACGCACAGGCGCAAAAATGACAGAGATAACACAATACACTATCCGTCAGGCCCGTCCCGCTGATGTTGCG