Homologs in group_1924

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14095 FBDBKF_14095 41.4 Morganella morganii S1 xaxA XaxA
EHELCC_08185 EHELCC_08185 41.4 Morganella morganii S2 xaxA XaxA
NLDBIP_08510 NLDBIP_08510 41.4 Morganella morganii S4 xaxA XaxA
LHKJJB_05755 LHKJJB_05755 41.4 Morganella morganii S3 xaxA XaxA
HKOGLL_05160 HKOGLL_05160 41.4 Morganella morganii S5 xaxA XaxA
F4V73_RS02840 F4V73_RS02840 40.9 Morganella psychrotolerans - alpha-xenorhabdolysin family binary toxin subunit A

Distribution of the homologs in the orthogroup group_1924

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1924

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08575
Feature type CDS
Gene -
Product alpha-xenorhabdolysin family binary toxin subunit A
Location 1871095 - 1872306 (strand: 1)
Length 1212 (nucleotides) / 403 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1924
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MDTTTLDHIDKVIEQYQLPEVTLSLILGKNIDHGRSAGIFTPYDLNKIKSYIDKVLKLPYQKDTIIELLGYEDINISQISAETIQTLFLNMRTHAFEWQKIEYSVKQQAIDLEITGREITSTGEQLLAFINKMPIIKKINRKIEDITPEELSSIKYSTQDKKVSKQLVAILESMKNDINEQYNNTLKIKNMIYDFRIEIVGGENSKGNICHSIYYDIINKKKYINDFFDNSDDSLNEQRILLENEIEILKKEYQHFVKLAFTGLAFGIIGVIITGGIFGSKAEKIRKKRNETIEKLHNINKGIKQQSTISECLQRFQVDLDEIEQYIEDADMSVEHLLYMWQTILTEINASLINFKKIDNAMELIRFSIYLEKIIAPWYMVVGYSKEMMAVFDEALSSFYSSK

Flanking regions ( +/- flanking 50bp)

TCTAAATTATGCCTTAATCATAACAAATAATTATACATAAGAGAGGTTATATGGATACAACCACCCTTGATCATATAGATAAAGTGATTGAACAATACCAACTTCCCGAAGTCACTCTTAGCTTAATTCTAGGTAAAAATATCGATCATGGACGTAGTGCGGGTATTTTTACACCTTATGATCTTAATAAAATCAAATCTTATATTGATAAAGTATTAAAATTACCTTATCAAAAAGACACTATTATTGAATTATTAGGCTACGAAGATATTAACATTTCCCAAATATCAGCTGAAACTATTCAAACCCTCTTCTTAAATATGAGAACACATGCCTTTGAATGGCAAAAAATTGAATACTCAGTAAAACAGCAAGCTATTGATTTAGAGATCACCGGTAGAGAAATCACGAGTACAGGTGAGCAACTATTGGCATTTATTAATAAAATGCCAATTATAAAAAAAATAAATAGGAAAATTGAAGATATCACACCAGAAGAACTCAGTTCAATAAAATATTCAACACAAGATAAAAAAGTGTCTAAGCAACTTGTTGCCATTTTAGAAAGCATGAAAAATGATATTAATGAGCAATATAATAATACCTTAAAAATAAAAAACATGATTTATGATTTTAGAATAGAAATTGTGGGAGGTGAAAATAGTAAAGGTAATATATGTCATTCAATTTATTATGATATCATTAATAAAAAGAAATATATTAATGATTTTTTTGATAATAGTGATGACTCACTAAATGAACAGAGAATTTTATTAGAAAATGAAATTGAAATATTAAAAAAAGAGTATCAACACTTCGTGAAACTCGCCTTTACGGGGTTAGCATTCGGTATTATTGGTGTGATCATTACTGGAGGGATCTTTGGTTCAAAAGCTGAAAAAATCCGTAAAAAAAGAAATGAAACAATAGAGAAACTACATAATATCAATAAAGGAATAAAACAACAATCAACTATTTCTGAGTGTTTACAACGTTTTCAAGTCGATTTAGACGAAATAGAACAATATATTGAAGATGCTGATATGTCTGTGGAGCATCTTCTTTATATGTGGCAAACAATTTTAACTGAAATTAATGCTTCATTAATTAATTTTAAAAAAATTGATAATGCAATGGAGTTAATTAGATTTAGTATTTATTTAGAAAAAATCATTGCACCTTGGTATATGGTGGTCGGTTACTCAAAGGAAATGATGGCGGTATTTGATGAAGCTTTATCCTCTTTTTATTCATCTAAATAACAAAAGGAAATGTTATGAATAGCGTAACTTCGCAATTACAGGAATTTGAT