Homologs in group_1886

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14095 FBDBKF_14095 79.2 Morganella morganii S1 xaxA XaxA
EHELCC_08185 EHELCC_08185 79.2 Morganella morganii S2 xaxA XaxA
NLDBIP_08510 NLDBIP_08510 79.2 Morganella morganii S4 xaxA XaxA
LHKJJB_05755 LHKJJB_05755 79.2 Morganella morganii S3 xaxA XaxA
HKOGLL_05160 HKOGLL_05160 79.2 Morganella morganii S5 xaxA XaxA
PMI_RS08575 PMI_RS08575 40.9 Proteus mirabilis HI4320 - alpha-xenorhabdolysin family binary toxin subunit A

Distribution of the homologs in the orthogroup group_1886

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1886

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02840
Feature type CDS
Gene -
Product alpha-xenorhabdolysin family binary toxin subunit A
Location 600711 - 601910 (strand: -1)
Length 1200 (nucleotides) / 399 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1886
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MHTQTIAIDRIILSNEVAPATLKLLLNEEDNTFRSAGIFTHDDLVQIKRYINYGLTLPREEEDVIDFIGYRETELAGFEPHNIQTLFKHIHQHALSWELVESATKQQAIDLEIAGFNITTTGNYILSAINEMPIITQAKITLQDASSEKLKSITYKKQDHIISGELVKILAAMKEDIIDERKKTQRVKNIIGRFRLELIGGLDETDNEIPSLMYEVKRKQKKLLKSQSSEKTDEIMSEIRMKNEEIEILKREYSQFVKLSFSGLVGGIIGLIITGTIFGYRAEQVRRRKNILIDEVAELQEKVIAQQAIQKLIIKLDKELSTLDGYFSDAHIAVDHLDFMWQVMLTEVTESMNTFMQINDAYSLLQFSLQLKKVTLPWQRVRGYSKELLAIFDTAILAA

Flanking regions ( +/- flanking 50bp)

TTTCGGCCACATCCACCCGGATTTATGTATCTCATAACAAGGGGATATTTATGCACACACAAACAATCGCTATTGACAGGATTATTCTTTCAAATGAAGTTGCACCAGCAACATTAAAGCTGCTTCTTAATGAGGAAGATAATACATTCCGTTCCGCCGGAATATTTACCCATGATGATTTAGTACAGATTAAACGCTATATCAATTACGGGCTGACACTTCCGCGTGAAGAAGAGGATGTTATTGATTTTATCGGCTATCGTGAAACTGAACTGGCCGGCTTCGAGCCACATAATATACAAACCCTGTTTAAGCATATTCATCAGCATGCGCTGAGCTGGGAGCTGGTGGAATCAGCAACCAAACAGCAGGCTATTGACCTGGAGATTGCCGGGTTCAATATCACCACCACCGGCAATTATATATTAAGTGCCATAAATGAAATGCCGATTATCACTCAGGCAAAAATAACCTTACAGGATGCATCATCTGAAAAATTAAAAAGTATCACGTACAAAAAACAGGATCATATTATCTCCGGGGAACTGGTGAAAATATTAGCCGCAATGAAAGAAGATATTATTGATGAAAGAAAAAAAACACAGCGTGTGAAAAACATTATCGGCAGATTCCGCCTGGAACTGATTGGCGGACTGGATGAAACTGATAATGAAATTCCGTCACTGATGTATGAAGTCAAACGTAAACAGAAAAAATTACTTAAAAGTCAGAGTAGTGAAAAAACTGACGAAATTATGTCTGAAATCCGGATGAAAAATGAGGAAATAGAGATCCTCAAACGGGAATACAGCCAGTTTGTAAAACTGTCATTCTCAGGTCTGGTCGGCGGTATCATTGGTCTGATTATCACCGGTACCATTTTTGGTTACCGCGCAGAACAGGTGCGGCGGCGTAAAAACATACTGATCGACGAGGTTGCTGAGCTACAGGAAAAAGTCATTGCCCAGCAGGCGATACAAAAACTGATCATTAAACTGGATAAAGAACTCAGTACGCTGGATGGTTATTTCTCAGATGCACATATTGCCGTCGATCATCTCGATTTTATGTGGCAGGTCATGCTGACAGAAGTAACCGAATCCATGAATACCTTTATGCAGATAAATGATGCATACAGCCTTCTGCAATTTTCATTACAGCTAAAAAAAGTCACACTGCCGTGGCAGCGTGTACGCGGATATTCAAAAGAACTCCTCGCAATTTTTGATACTGCAATATTAGCCGCTTAACAGGAGAATATGATGATGAACTCTGACCTTATTCCTGAAAAAATCACATT