Homologs in group_1886

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14095 FBDBKF_14095 100.0 Morganella morganii S1 xaxA XaxA
EHELCC_08185 EHELCC_08185 100.0 Morganella morganii S2 xaxA XaxA
LHKJJB_05755 LHKJJB_05755 100.0 Morganella morganii S3 xaxA XaxA
HKOGLL_05160 HKOGLL_05160 100.0 Morganella morganii S5 xaxA XaxA
F4V73_RS02840 F4V73_RS02840 79.2 Morganella psychrotolerans - alpha-xenorhabdolysin family binary toxin subunit A
PMI_RS08575 PMI_RS08575 41.4 Proteus mirabilis HI4320 - alpha-xenorhabdolysin family binary toxin subunit A

Distribution of the homologs in the orthogroup group_1886

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1886

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08510
Feature type CDS
Gene xaxA
Product XaxA
Location 103314 - 104513 (strand: -1)
Length 1200 (nucleotides) / 399 (amino acids)

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1886
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Protein Sequence

MHTQTMPVDRIITADEIAPATLKLLLNEEDDTFRPAGIFTHNDLVHIKRYIHYGMTLPRETEDVIEFIGYRDTELPGFEPHNIQHLFVHIHQHALSWEHVESMTKQQAIDLEIAGAAITATGNYILNAINEMPVIRRAEVLLQDATEDKLKDITYRRQDNVISGELTKILSAMKDDITEERQKTQQVKNIISRFRLELTGGTDESGNEIPSLIYEVKRKQKILLKNRDGDTTRELQSEIRVRNEEIEILKREYSQFVKLSFSGLVGGIIGLIITGGIFGYRAEQVRRRKNKLLEEVAELEEQVISRQAIQQLIIRLDKELSTLDGYFTDAHVAVDHLDFMWQVMLTEITESLNTFMQINDAYSLLQFSLHLKKITLPWQRVRGYAKELVAIFDTANLAA

Flanking regions ( +/- flanking 50bp)

TTCGGCCCCATTCACCACAGAGTTACGTATCTCATTACAGGGAGATATTTATGCACACACAAACCATGCCGGTTGACCGGATTATTACAGCGGATGAAATTGCCCCCGCCACGTTAAAGTTACTTCTGAATGAAGAAGACGATACTTTCCGGCCTGCGGGTATATTCACACATAATGATCTGGTTCATATCAAACGTTATATTCACTACGGAATGACCCTTCCCCGGGAAACAGAAGATGTTATTGAGTTTATCGGATACAGAGATACAGAGCTGCCCGGTTTTGAGCCTCATAATATTCAGCATTTATTTGTCCATATTCATCAGCATGCTCTGAGCTGGGAGCATGTTGAATCCATGACAAAACAACAGGCGATTGATCTTGAAATTGCCGGTGCCGCTATTACGGCAACCGGTAACTATATTCTGAATGCCATCAATGAAATGCCGGTGATCCGCCGGGCTGAAGTTTTATTACAGGATGCAACCGAGGATAAATTAAAAGATATCACTTACAGGAGGCAGGACAACGTTATTTCCGGAGAACTGACAAAAATATTATCTGCCATGAAAGACGATATTACGGAAGAACGGCAAAAAACACAGCAGGTAAAAAATATTATTTCCCGCTTCCGGCTGGAATTAACCGGCGGAACAGATGAATCCGGGAATGAAATTCCGTCTCTGATTTATGAAGTCAAACGTAAACAAAAAATATTATTAAAAAACCGGGATGGTGACACCACCCGCGAACTGCAGTCTGAGATACGGGTCAGAAATGAAGAGATTGAAATTCTGAAGCGCGAGTACAGCCAGTTTGTGAAGCTCTCATTCTCCGGTCTGGTCGGCGGTATTATCGGGCTGATTATCACAGGGGGTATTTTTGGTTACCGCGCCGAACAGGTACGCCGCCGTAAAAATAAATTACTGGAAGAAGTAGCAGAGCTGGAAGAACAGGTTATTTCCCGGCAAGCTATACAACAGCTGATTATCAGACTGGATAAAGAACTGAGCACACTGGACGGTTATTTTACTGATGCTCATGTTGCCGTCGATCATCTCGATTTCATGTGGCAGGTCATGCTGACAGAAATTACTGAATCCCTGAATACCTTTATGCAGATAAATGATGCATACAGCCTCTTACAATTTTCTTTGCATCTGAAAAAAATCACACTTCCCTGGCAGCGTGTTCGTGGCTATGCAAAAGAACTCGTCGCTATTTTTGATACCGCTAATCTGGCAGCATAATGAAGGAGATTATTATGATATATTCTGACATCAATCCTGAAAACATTACC