Homologs in group_137

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10 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS08885 PMI_RS08885 57.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09470 PMI_RS09470 77.0 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09480 PMI_RS09480 76.5 Proteus mirabilis HI4320 - DUF1120 domain-containing protein
PMI_RS09490 PMI_RS09490 78.3 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS09505 PMI_RS09505 45.7 Proteus mirabilis HI4320 - DUF1120 domain-containing protein
PMI_RS10610 PMI_RS10610 63.9 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS15290 PMI_RS15290 22.2 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS15295 PMI_RS15295 32.5 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS15300 PMI_RS15300 32.3 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS15305 PMI_RS15305 33.5 Proteus mirabilis HI4320 - DUF1120 domain-containing protein

Distribution of the homologs in the orthogroup group_137

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_137

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07950
Feature type CDS
Gene -
Product fimbrial protein
Location 1741563 - 1742255 (strand: 1)
Length 693 (nucleotides) / 230 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_137
Orthogroup size 11
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKKVLLSLAMLSVISTPVLAKTPVANLKINGDIKPPTCTVHGATQSDVIFDYGVISPTLIPQSKNYEYPLATGKNTVTVECDAKTYLTFVASDTYDSAELANDTTGQFHLVDKANPEAAVGAAFFIWTNITVDGKPAYISRANDVAITGNKFNNVLYKGPTNGWTSEQQSDINKNSLSLISGEIFQANFSQGKTSRTFILSKDALSKKGIDIADGLDFVGEVVLTFNFGV

Flanking regions ( +/- flanking 50bp)

TAATATTGTTTTGTTATTTATCCTCTAAAAAAGAATAAAGGAATAATGATATGAAAAAAGTATTACTCAGTCTTGCTATGCTGAGTGTAATATCAACGCCGGTATTGGCTAAAACGCCTGTTGCTAACTTAAAAATCAATGGTGATATTAAGCCACCAACTTGTACTGTTCATGGGGCGACACAAAGTGATGTTATTTTTGATTACGGAGTCATAAGCCCAACACTTATCCCTCAATCGAAAAACTACGAGTATCCTTTAGCTACAGGTAAAAATACCGTTACGGTTGAATGTGATGCTAAAACATATTTAACCTTTGTTGCATCTGATACTTATGACAGTGCGGAATTAGCTAATGATACGACAGGACAATTTCATTTAGTTGATAAAGCAAATCCTGAAGCCGCTGTTGGTGCAGCTTTTTTTATATGGACAAATATTACTGTCGATGGTAAGCCTGCGTATATTTCACGAGCAAATGATGTTGCTATTACGGGGAATAAATTTAATAACGTCCTATACAAAGGCCCTACCAATGGTTGGACCTCAGAACAACAATCAGATATTAATAAAAACTCTCTGTCTCTCATTTCAGGTGAAATTTTCCAAGCGAATTTCAGTCAAGGAAAGACAAGTCGTACTTTTATTTTATCCAAAGATGCACTAAGTAAAAAAGGAATAGATATTGCTGATGGATTAGATTTTGTCGGAGAGGTTGTTCTCACTTTTAACTTTGGGGTCTAATTTTAACATATTGATAATCACATTATAATTAACCTTTATATTGTGATTAT