Homologs in group_1053

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05450 FBDBKF_05450 60.6 Morganella morganii S1 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
EHELCC_12140 EHELCC_12140 60.6 Morganella morganii S2 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
NLDBIP_12480 NLDBIP_12480 60.6 Morganella morganii S4 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
LHKJJB_12340 LHKJJB_12340 60.6 Morganella morganii S3 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
HKOGLL_10955 HKOGLL_10955 60.6 Morganella morganii S5 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
F4V73_RS03845 F4V73_RS03845 58.6 Morganella psychrotolerans - MipA/OmpV family protein

Distribution of the homologs in the orthogroup group_1053

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1053

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A909 1.41e-71 222 44 3 251 3 mipA MltA-interacting protein Shigella flexneri
P0A908 1.41e-71 222 44 3 251 1 mipA MltA-interacting protein Escherichia coli (strain K12)
P58224 2.13e-50 168 33 2 248 3 yiaT Putative outer membrane protein YiaT Escherichia coli O157:H7
P37681 2.18e-50 168 33 2 248 3 yiaT Putative outer membrane protein YiaT Escherichia coli (strain K12)
Q9AB80 1.01e-10 63 30 3 124 3 CC_0351 Putative outer membrane protein CC_0351 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07300
Feature type CDS
Gene -
Product MipA/OmpV family protein
Location 1598031 - 1598783 (strand: -1)
Length 753 (nucleotides) / 250 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1053
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06629 MltA-interacting protein MipA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3713 Cell wall/membrane/envelope biogenesis (M) M Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07274 MipA family protein - -

Protein Sequence

MSKKKIVISLAIIAGLSTPTAFAGEWSIGGSVLSQVTPYKGAKSKDYLLPVPLVNYQSENFYFATLAAGYYLWNSPKDQLSVDVHYYPQAFKPSDSDDEQMKKLNRRRDTVMGGFTYKHHESWGSLRGIISGDLLGKSNGIIADAAYLYPFELGNWSLQPGIGAVWENKKQNRYAYGISQGESQRSGLAEYRPNDSWRPYVEISANYKFAENWDFFAMGRVDRLPSEVKDSPMVNKSVTAILWTGVTYTF

Flanking regions ( +/- flanking 50bp)

ACAGTCGTTTTTTGGTCACTGTTTTATCAAAGACAATATGGAAAATCATCGTGAGTAAAAAGAAAATTGTTATTTCTTTAGCCATAATCGCTGGATTGAGTACACCGACAGCCTTTGCGGGAGAATGGTCAATAGGGGGTTCTGTATTATCACAAGTAACACCTTATAAGGGTGCTAAATCTAAAGACTATTTATTACCTGTACCTTTGGTTAATTATCAATCTGAAAATTTCTATTTTGCGACATTAGCCGCAGGATATTATTTATGGAATTCACCGAAAGATCAGCTGTCTGTCGATGTTCACTATTACCCACAAGCATTTAAACCAAGTGACTCTGATGATGAGCAGATGAAAAAACTTAATCGTCGCCGTGATACCGTCATGGGTGGATTCACCTATAAACATCATGAGTCATGGGGAAGTTTACGAGGGATTATTTCAGGTGATCTTTTAGGTAAAAGTAATGGCATTATTGCTGATGCTGCTTACCTTTATCCTTTTGAACTAGGCAATTGGTCACTTCAACCGGGAATTGGTGCTGTTTGGGAAAATAAAAAGCAGAATCGTTACGCATATGGGATTAGTCAGGGAGAATCTCAGCGTAGTGGTTTAGCAGAATATCGACCAAATGATAGCTGGAGACCTTATGTTGAAATCTCAGCTAACTATAAGTTTGCTGAAAACTGGGATTTCTTCGCGATGGGACGAGTGGATCGCTTACCCAGCGAAGTTAAAGATAGCCCGATGGTAAATAAATCGGTAACGGCTATTTTATGGACAGGTGTCACTTATACTTTCTAACGGTAAAACGGTAAGTTAAGTTGCTTTCGATAACTAAAAGCTTCGAATTT