Homologs in group_986

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05450 FBDBKF_05450 86.1 Morganella morganii S1 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
EHELCC_12140 EHELCC_12140 86.1 Morganella morganii S2 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
NLDBIP_12480 NLDBIP_12480 86.1 Morganella morganii S4 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
LHKJJB_12340 LHKJJB_12340 86.1 Morganella morganii S3 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
HKOGLL_10955 HKOGLL_10955 86.1 Morganella morganii S5 ompV Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family
PMI_RS07300 PMI_RS07300 58.6 Proteus mirabilis HI4320 - MipA/OmpV family protein

Distribution of the homologs in the orthogroup group_986

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_986

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A909 2.39e-69 216 44 1 245 3 mipA MltA-interacting protein Shigella flexneri
P0A908 2.39e-69 216 44 1 245 1 mipA MltA-interacting protein Escherichia coli (strain K12)
P58224 1.75e-48 163 34 2 252 3 yiaT Putative outer membrane protein YiaT Escherichia coli O157:H7
P37681 2.5e-48 162 34 2 252 3 yiaT Putative outer membrane protein YiaT Escherichia coli (strain K12)
Q9AB80 3.41e-11 65 25 7 209 3 CC_0351 Putative outer membrane protein CC_0351 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P06111 7.55e-05 46 21 1 195 1 ompV Outer membrane protein OmpV Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
O08237 9.26e-05 46 20 1 195 3 None Outer membrane protein Omp26La Vibrio anguillarum

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03845
Feature type CDS
Gene -
Product MipA/OmpV family protein
Location 815577 - 816335 (strand: 1)
Length 759 (nucleotides) / 252 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_986
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06629 MltA-interacting protein MipA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3713 Cell wall/membrane/envelope biogenesis (M) M Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07274 MipA family protein - -

Protein Sequence

MHKKIIGLLATAVLASLSASALADDGKWSVGASVLYQEQAYRGTKTSDKFMPVPMVNYDGKNFYFHTLATGYYLWNDKKDQLSVDLYYYPQAYRAKDNKDSRMRKLDNRRDTAMAGMSYRHHEEWGTLRANFSGDILGKSDGMRFDGAYLYNVKGDSWSLQPGVGVVWKSERQNRYEYGITDTESRRSGLDEYRPGSSFMPYIEVTGNYKFDDNWSAFAMGRIDLLPNEAKDSPMVDKKTASILWTGVTYSF

Flanking regions ( +/- flanking 50bp)

CGAATACGTATCACTGTAATTTGCAGACGAATTTAACTCAGGAAATAATAATGCATAAGAAAATAATCGGTTTGCTGGCAACGGCAGTGCTGGCGTCATTGTCTGCCTCCGCATTGGCGGATGACGGCAAGTGGTCTGTCGGGGCCTCTGTTTTATACCAGGAACAGGCCTATCGCGGGACAAAAACGTCAGATAAATTCATGCCGGTTCCGATGGTTAACTATGATGGTAAAAACTTTTATTTCCATACGTTAGCGACGGGTTACTATCTGTGGAATGATAAGAAAGATCAGCTTTCTGTCGATCTTTATTACTATCCGCAGGCTTACCGCGCTAAAGATAATAAAGATTCCCGTATGCGCAAGCTTGATAACCGTCGTGATACAGCGATGGCGGGCATGAGCTATCGTCATCATGAAGAGTGGGGAACATTGCGCGCTAATTTCTCCGGTGATATCCTCGGGAAAAGTGACGGCATGCGCTTTGATGGCGCTTACCTCTACAACGTTAAAGGTGATAGCTGGTCACTTCAGCCGGGTGTCGGGGTTGTCTGGAAGAGTGAGCGCCAGAACCGCTATGAATACGGCATAACCGATACAGAATCCCGCCGCAGCGGTCTGGATGAATACCGTCCGGGCAGCAGTTTTATGCCGTATATTGAAGTGACAGGAAATTATAAGTTTGATGATAATTGGTCAGCGTTCGCAATGGGTCGTATTGACCTGTTACCGAATGAAGCCAAAGACAGCCCGATGGTGGATAAAAAAACCGCCTCAATTCTGTGGACCGGCGTAACTTATAGCTTCTGATAAAACAGACAGACTACTGAGCTGCACCTGACAGGCTGTCCGGTGCAGTT