Homologs in group_1859

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13500 FBDBKF_13500 51.2 Morganella morganii S1 catE VOC family protein
EHELCC_08595 EHELCC_08595 51.2 Morganella morganii S2 catE VOC family protein
NLDBIP_08920 NLDBIP_08920 51.2 Morganella morganii S4 catE VOC family protein
LHKJJB_05345 LHKJJB_05345 51.2 Morganella morganii S3 catE VOC family protein
HKOGLL_05570 HKOGLL_05570 51.2 Morganella morganii S5 catE VOC family protein
F4V73_RS03260 F4V73_RS03260 53.5 Morganella psychrotolerans - VOC family protein

Distribution of the homologs in the orthogroup group_1859

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1859

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52096 1.3e-56 175 63 0 127 4 yaeR Uncharacterized protein YaeR Escherichia coli (strain K12)
P45871 5.24e-47 150 58 0 124 4 ywkD Uncharacterized protein YwkD Bacillus subtilis (strain 168)
A1YPR3 5.84e-08 52 27 4 144 1 cetB 2-epi-5-epi-valiolone epimerase Actinomyces sp.
A4IS40 3.67e-06 46 29 5 133 3 fosB Metallothiol transferase FosB Geobacillus thermodenitrificans (strain NG80-2)
Q9KT93 5.73e-06 46 25 2 124 3 gloA Probable lactoylglutathione lyase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q55595 3.73e-05 43 25 2 122 3 gloA Probable lactoylglutathione lyase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P46235 4.73e-05 43 23 3 126 3 gloA Probable lactoylglutathione lyase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P54540 0.000779 40 28 3 99 3 yqjC Uncharacterized protein YqjC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06565
Feature type CDS
Gene -
Product VOC family protein
Location 1438975 - 1439364 (strand: 1)
Length 390 (nucleotides) / 129 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1859
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0346 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08234 glyoxylase I family protein - -

Protein Sequence

MLKLNKIHHVAIICSDYKISKHFYCQILGLSLLNEKYREEIQSWKAELALGTVYQIELFSFPDAPARLSYPEARGLRHVAFAVDDLDASVAYLQQNNIQCEPIRLDPSSQKRFTFFQDPDGLPLELYSI

Flanking regions ( +/- flanking 50bp)

CTTTATAGCATAATTTATCTTATGTTATTTTTTTATTAGTTGAGTTATCAATGTTAAAATTAAATAAAATTCATCATGTGGCGATTATTTGTTCTGATTATAAGATCAGCAAACATTTTTATTGTCAAATACTGGGGCTTAGCCTATTAAATGAAAAATACCGTGAAGAAATACAATCTTGGAAAGCAGAGCTTGCGTTAGGTACAGTCTACCAAATTGAATTATTTAGCTTCCCAGATGCGCCAGCACGCTTAAGTTACCCAGAAGCTCGTGGTCTACGCCATGTGGCATTTGCAGTGGACGATCTTGATGCTTCAGTTGCTTATTTACAACAAAACAATATTCAATGCGAGCCAATACGTCTAGATCCTAGTAGCCAAAAACGTTTTACCTTTTTTCAAGATCCCGATGGCTTACCTTTAGAGCTTTATTCAATATAGTTCACAACATATAACAAGGCCGCAATAAATAATGCGGCCCAAATTAATAT