Homologs in group_1004

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05090 FBDBKF_05090 41.4 Morganella morganii S1 pgpB Membrane-associated phospholipid phosphatase
EHELCC_12500 EHELCC_12500 41.4 Morganella morganii S2 pgpB Membrane-associated phospholipid phosphatase
NLDBIP_12840 NLDBIP_12840 41.4 Morganella morganii S4 pgpB Membrane-associated phospholipid phosphatase
LHKJJB_12700 LHKJJB_12700 41.4 Morganella morganii S3 pgpB Membrane-associated phospholipid phosphatase
HKOGLL_11315 HKOGLL_11315 41.4 Morganella morganii S5 pgpB Membrane-associated phospholipid phosphatase
F4V73_RS05545 F4V73_RS05545 41.0 Morganella psychrotolerans - phosphatase PAP2 family protein

Distribution of the homologs in the orthogroup group_1004

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1004

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A926 5.94e-51 169 36 0 231 3 pgpB Phosphatidylglycerophosphatase B Shigella flexneri
P0A924 5.94e-51 169 36 0 231 1 pgpB Phosphatidylglycerophosphatase B Escherichia coli (strain K12)
P0A925 5.94e-51 169 36 0 231 3 pgpB Phosphatidylglycerophosphatase B Escherichia coli O157:H7
P44570 2.36e-26 105 32 5 208 3 pgpB Phosphatidylglycerophosphatase B Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06350
Feature type CDS
Gene pgpB
Product phosphatidylglycerophosphatase B
Location 1390835 - 1391554 (strand: -1)
Length 720 (nucleotides) / 239 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1004
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01569 PAP2 superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0671 Lipid transport and metabolism (I) I Membrane-associated phospholipid phosphatase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01096 phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] Glycerophospholipid metabolism
Metabolic pathways		 -

Protein Sequence

MNKQISVLMLLGSGLLLIVPIVVLILGWQWQPSAHPLGGESTLWIANSAAKPWGALTILLCLVLLFFILKLPKKAFIQLAIIMVATLMLGQLIKVAVKNSVKEPRPYVVWVSNQLSISPEHFYQVSRPEREQLLHNGLSHSSLIPQWQLSHWRAETGYAFPSGHSLFSATLALFVFVLCMLRRHYFLASLGILWGIDVTVGRIILGMHWASDVIVGILISAVLVWCAFWMIERRLLLKP

Flanking regions ( +/- flanking 50bp)

ATCATCAGTAAATAAAAACAGTGCATACAGAATAGATAAGGACAAATAGATTGAATAAGCAAATATCAGTATTGATGCTTTTAGGAAGTGGATTGCTTTTGATTGTACCTATTGTGGTGCTTATTCTGGGATGGCAATGGCAACCATCAGCACATCCTCTGGGAGGCGAAAGCACTTTATGGATAGCCAATAGTGCGGCTAAACCTTGGGGAGCTTTAACTATATTACTTTGCCTTGTTTTGCTCTTTTTTATTCTTAAACTACCTAAAAAAGCATTTATTCAGTTAGCAATTATTATGGTCGCGACTTTGATGTTGGGGCAGTTGATCAAAGTGGCTGTAAAAAATAGCGTTAAAGAGCCACGACCTTATGTGGTTTGGGTCAGTAACCAACTATCAATATCACCAGAACATTTTTACCAAGTGTCTCGTCCTGAGCGTGAGCAACTGTTGCATAATGGATTATCTCATTCGTCGCTGATCCCTCAATGGCAATTAAGCCATTGGCGAGCAGAAACCGGTTATGCCTTTCCTTCTGGACACAGCTTATTCTCTGCAACACTGGCTTTATTTGTGTTTGTGCTGTGTATGTTACGACGTCATTATTTTTTAGCCAGCTTAGGGATATTATGGGGTATTGATGTGACTGTCGGACGAATAATATTAGGTATGCACTGGGCATCTGATGTGATTGTCGGTATTCTGATTAGTGCTGTGTTGGTGTGGTGTGCATTTTGGATGATTGAACGACGATTGTTGTTAAAACCTTGATAATCGTTTTTCTTTTTGAGATAGCGAATTTATTTTTCACTATTTATGTG