Homologs in group_1004

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05090 FBDBKF_05090 72.4 Morganella morganii S1 pgpB Membrane-associated phospholipid phosphatase
EHELCC_12500 EHELCC_12500 72.4 Morganella morganii S2 pgpB Membrane-associated phospholipid phosphatase
NLDBIP_12840 NLDBIP_12840 72.4 Morganella morganii S4 pgpB Membrane-associated phospholipid phosphatase
LHKJJB_12700 LHKJJB_12700 72.4 Morganella morganii S3 pgpB Membrane-associated phospholipid phosphatase
HKOGLL_11315 HKOGLL_11315 72.4 Morganella morganii S5 pgpB Membrane-associated phospholipid phosphatase
PMI_RS06350 PMI_RS06350 41.0 Proteus mirabilis HI4320 pgpB phosphatidylglycerophosphatase B

Distribution of the homologs in the orthogroup group_1004

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1004

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A926 1.22e-52 173 37 0 224 3 pgpB Phosphatidylglycerophosphatase B Shigella flexneri
P0A924 1.22e-52 173 37 0 224 1 pgpB Phosphatidylglycerophosphatase B Escherichia coli (strain K12)
P0A925 1.22e-52 173 37 0 224 3 pgpB Phosphatidylglycerophosphatase B Escherichia coli O157:H7
P44570 4.66e-29 112 34 4 217 3 pgpB Phosphatidylglycerophosphatase B Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05545
Feature type CDS
Gene -
Product phosphatase PAP2 family protein
Location 1177976 - 1178695 (strand: -1)
Length 720 (nucleotides) / 239 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1004
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01569 PAP2 superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0671 Lipid transport and metabolism (I) I Membrane-associated phospholipid phosphatase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01096 phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] Glycerophospholipid metabolism
Metabolic pathways		 -

Protein Sequence

MKNVTKPFIIVFVLLLLLPLVMLLTGWRWQPAGDDDLLRGLWYLTDTAANPLAIIVSVFFCFLFIGLFPGSRKQAVRLAAMMLIVIAAGQGVKVVMKNTLQEPRPYVAWLAQQHIITETDFYALSRTERAQLLENRLSNHYQIPGWQLKHWQSETGYAFPSGHALFAGAWSMLLFAFFWAQRRTGIAMVILLWGILAQYSRMVLGMHWPSDIIMSVIINGLLVGGLFLWLNKQSGKEVL

Flanking regions ( +/- flanking 50bp)

CAAGACATTGACAAAATAACATTTATTTTAACAGGAATAATTAACCAGCAATGAAAAACGTAACAAAACCCTTCATTATTGTCTTTGTTTTATTACTTTTGTTGCCGCTGGTGATGCTGCTGACCGGCTGGCGCTGGCAACCTGCCGGTGATGACGATTTGTTGCGCGGGTTATGGTATCTGACGGATACGGCAGCGAATCCGCTGGCCATTATTGTATCTGTCTTCTTTTGTTTTTTGTTTATTGGTTTGTTTCCCGGTAGCAGAAAGCAGGCTGTGCGCCTTGCGGCGATGATGCTGATAGTGATTGCGGCAGGTCAGGGGGTTAAAGTCGTGATGAAAAATACCCTGCAGGAGCCACGTCCTTATGTCGCCTGGCTGGCACAGCAGCACATTATTACGGAAACTGATTTTTATGCACTGTCCCGGACTGAGCGCGCTCAATTGCTGGAAAACAGACTGTCAAACCATTATCAGATCCCGGGCTGGCAGTTAAAGCACTGGCAGAGTGAAACCGGGTATGCGTTTCCGTCCGGTCATGCCTTATTCGCCGGTGCGTGGTCAATGCTGTTATTTGCTTTCTTCTGGGCGCAGCGGCGTACGGGGATAGCGATGGTGATTCTTCTCTGGGGGATTCTGGCACAATACAGCCGCATGGTGCTGGGGATGCACTGGCCGTCTGATATTATTATGTCAGTGATTATTAATGGGTTACTTGTGGGCGGCCTGTTTTTATGGCTCAATAAACAGAGCGGAAAAGAGGTATTATGATATAATCACATCCCGCTGAAACCGTTGTCGGTTTTTTGTATAAATTGAGG