Homologs in group_921

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05000 FBDBKF_05000 32.3 Morganella morganii S1 - DUF945 domain-containing protein
EHELCC_12590 EHELCC_12590 32.3 Morganella morganii S2 - DUF945 domain-containing protein
NLDBIP_12930 NLDBIP_12930 32.3 Morganella morganii S4 - DUF945 domain-containing protein
LHKJJB_12790 LHKJJB_12790 32.3 Morganella morganii S3 - DUF945 domain-containing protein
HKOGLL_11405 HKOGLL_11405 32.3 Morganella morganii S5 - DUF945 domain-containing protein
F4V73_RS05445 F4V73_RS05445 30.6 Morganella psychrotolerans - YdgA family protein

Distribution of the homologs in the orthogroup group_921

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_921

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77804 1.36e-46 173 28 16 526 1 ydgA Protein YdgA Escherichia coli (strain K12)
P32128 5.14e-25 111 24 14 502 3 yihF Uncharacterized protein YihF Escherichia coli (strain K12)
P44132 0.000294 47 28 5 161 4 HI_1236 Uncharacterized protein HI_1236 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06260
Feature type CDS
Gene -
Product YdgA family protein
Location 1371907 - 1373580 (strand: 1)
Length 1674 (nucleotides) / 557 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_921
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06097 Bacterial protein of unknown function (DUF945)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5339 Function unknown (S) S Uncharacterized conserved protein YdgA, DUF945 family

Protein Sequence

MKKSLVAVGVIVALGVVWTGASWYMGSKIESRLQEETKRTNVQLAQLAKESQLGADIKLEIRDYKKGVFTSTADLAVVISEHAKSDEDKKVEEVLFKTDIDHGPFPLSDIAQFNLAPKLAAMNNTLVNNETTKDLFKLTKEPSFIDMHSSLSFDGSVSGKVNINPINYSKDGSQLTTSAFQIDFSSDKNATNISTAVKGDEVIVKKGNDETFTLKNIAGSVEGTKVKDDQYLFDTQTLNFGDITFTSQDKSSNFTLKDTSLATKSQIKDKLFFITQDYSFKSLNVGGFDFGAGKFAYSIDKADPDAMLLLTKVYNSTFLPWNQNKYDNSAMIEQAVRDVLEKGLVFRIDEASLTNSSGASKLNFKLDLNAFNADALKKEDKAPSVLFNELFNNINFNIDLSVPMLTEFRSTTQYLDVMRYSEKGLTDEDKAEIQKTTANDMAQLKTELQQNINQISQDEKDALPLMLLSQDGNKLSLNLNYAADKFTMNGKTYSFDEFMEVTQAPQMLGLAAMLFGAGASSYDYDDSDYPEYSEEPDQNDAIEEPQVEIPAAPAENN

Flanking regions ( +/- flanking 50bp)

AATCTTAAGAACGTATGCTACGAAGCATACACAGAGGATGGACTAGAATTATGAAGAAATCGCTTGTCGCTGTTGGTGTTATTGTTGCACTAGGTGTTGTTTGGACCGGTGCATCATGGTACATGGGCAGTAAAATTGAAAGCCGCTTACAGGAAGAAACCAAACGCACTAACGTTCAATTAGCGCAACTTGCTAAAGAAAGCCAATTAGGTGCGGATATTAAACTTGAAATTCGTGACTATAAGAAAGGCGTCTTTACTTCTACTGCTGATCTTGCGGTTGTGATTTCAGAGCATGCCAAATCAGATGAAGATAAAAAAGTAGAAGAAGTGCTCTTTAAGACGGATATTGACCATGGGCCATTCCCTCTTTCTGATATTGCTCAATTTAATCTAGCTCCTAAGTTAGCAGCAATGAATAATACTTTAGTGAATAATGAGACCACTAAAGATCTATTTAAGTTGACCAAAGAGCCATCATTTATTGATATGCACTCTTCTTTATCGTTTGATGGCAGTGTATCAGGTAAAGTTAACATAAATCCTATTAATTACAGCAAAGATGGTAGCCAGTTAACAACATCTGCGTTTCAGATTGATTTTTCTTCCGATAAAAATGCAACAAACATCTCAACAGCAGTAAAAGGTGATGAAGTCATTGTTAAGAAAGGTAATGATGAAACCTTTACGCTGAAAAATATTGCAGGCTCTGTCGAAGGAACTAAAGTTAAAGACGATCAATATCTATTTGATACACAAACACTGAACTTTGGCGATATTACCTTTACGAGCCAAGATAAGTCATCTAATTTCACTTTAAAAGATACTTCTCTTGCTACTAAGAGCCAAATTAAAGATAAATTATTCTTTATCACTCAAGATTATAGTTTTAAATCTCTTAATGTTGGTGGTTTTGATTTTGGTGCGGGTAAATTTGCTTACTCAATTGATAAAGCAGACCCAGATGCGATGTTGCTATTAACAAAAGTTTATAACAGCACCTTCTTACCTTGGAATCAAAATAAATACGATAATTCAGCGATGATTGAGCAAGCTGTACGTGATGTTTTGGAAAAAGGTTTAGTATTCCGTATCGATGAAGCATCGCTTACCAATAGCAGTGGCGCAAGCAAACTAAACTTTAAGTTAGATTTAAATGCGTTCAATGCTGATGCACTGAAAAAAGAAGACAAGGCGCCTTCAGTTCTGTTTAATGAATTGTTTAATAATATCAATTTTAATATCGATCTTTCTGTACCAATGCTAACGGAGTTCCGTAGTACCACACAATACCTTGATGTTATGCGTTATTCTGAAAAAGGCTTAACAGACGAAGATAAAGCTGAAATTCAGAAAACAACCGCTAACGACATGGCACAGTTAAAAACTGAATTACAGCAAAATATCAATCAAATTTCTCAAGACGAGAAAGATGCTCTGCCATTGATGCTGTTATCACAAGACGGTAATAAACTGTCTTTAAACCTGAACTATGCTGCTGATAAATTTACTATGAACGGTAAAACTTACAGCTTTGATGAGTTTATGGAAGTAACACAAGCCCCTCAAATGTTAGGTTTAGCGGCTATGTTATTTGGTGCAGGTGCTTCTTCTTATGATTATGATGACTCTGATTATCCTGAATATTCAGAAGAGCCAGATCAAAATGATGCAATAGAAGAGCCACAAGTTGAAATCCCAGCGGCACCTGCTGAAAACAATTAATTTTAGTCACTGATAGCATACAGTCACTAATCAATAAAGCCCCCTATCAC