COG5339


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5339, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YdgA, DUF945 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG5339 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_921 FBDBKF_05000 4733 6322 1 DUF945 domain-containing protein Morganella morganii S1
1 group_921 EHELCC_12590 175172 176761 -1 DUF945 domain-containing protein Morganella morganii S2
2 group_921 NLDBIP_12930 175127 176716 -1 DUF945 domain-containing protein Morganella morganii S4
3 group_921 LHKJJB_12790 175172 176761 -1 DUF945 domain-containing protein Morganella morganii S3
4 group_921 HKOGLL_11405 175172 176761 -1 DUF945 domain-containing protein Morganella morganii S5
5 group_921 F4V73_RS05445 1157393 1158970 1 YdgA family protein Morganella psychrotolerans
6 group_921 PMI_RS06260 1371907 1373580 1 YdgA family protein Proteus mirabilis HI4320