Homologs in group_1815

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13455 FBDBKF_13455 81.1 Morganella morganii S1 znuB ABC-type Mn2+/Zn2+ transport system, permease component
EHELCC_08640 EHELCC_08640 81.1 Morganella morganii S2 znuB ABC-type Mn2+/Zn2+ transport system, permease component
NLDBIP_08965 NLDBIP_08965 81.1 Morganella morganii S4 znuB ABC-type Mn2+/Zn2+ transport system, permease component
LHKJJB_05300 LHKJJB_05300 81.1 Morganella morganii S3 znuB ABC-type Mn2+/Zn2+ transport system, permease component
HKOGLL_05615 HKOGLL_05615 81.1 Morganella morganii S5 znuB ABC-type Mn2+/Zn2+ transport system, permease component
F4V73_RS03310 F4V73_RS03310 82.1 Morganella psychrotolerans - metal ABC transporter permease

Distribution of the homologs in the orthogroup group_1815

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1815

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56954 2.66e-157 443 78 1 293 3 yfeC Chelated iron transport system membrane protein YfeC Yersinia pestis
P44661 4.33e-137 392 71 0 281 3 HI_0360 Probable iron transport system membrane protein HI_0360 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q55282 3.13e-84 258 45 2 289 1 mntB Manganese transport system membrane protein MntB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P44660 1.02e-66 212 39 0 266 3 HI_0359 Probable iron transport system membrane protein HI_0359 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q92AG0 5.91e-66 211 41 1 276 3 mntC Manganese transport system membrane protein MntC Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q8Y652 2.19e-65 209 41 1 276 3 mntC Manganese transport system membrane protein MntC Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q56955 1.5e-64 207 37 1 295 3 yfeD Chelated iron transport system membrane protein YfeD Yersinia pestis
Q9KD29 1.98e-59 194 37 1 278 3 mntC Manganese transport system membrane protein MntC Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P31309 8.47e-53 177 36 5 286 3 None Manganese import system permease protein ScaB Streptococcus parasanguinis
P42361 3.57e-52 175 35 3 273 3 scaB Manganese import system permease protein ScaB Streptococcus gordonii
P42362 6.93e-40 143 33 4 273 3 None Manganese import system permease protein ScaB Streptococcus pneumoniae
P31606 9.81e-40 144 33 1 247 3 None Uncharacterized membrane protein in ycf23-apcF intergenic region Cyanophora paradoxa
O34500 5.59e-31 120 28 5 281 2 mntD Manganese transport system membrane protein MntD Bacillus subtilis (strain 168)
O35024 2.8e-27 113 32 9 297 2 mntC Manganese transport system membrane protein MntC Bacillus subtilis (strain 168)
P96119 3.03e-25 106 33 7 269 3 troD Zinc transport system membrane protein TroD Treponema pallidum (strain Nichols)
P73087 2.16e-23 100 27 3 269 3 slr2045 Uncharacterized membrane protein slr2045 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O83079 5.73e-19 87 25 0 240 3 TP_0036 Probable metal transport system membrane protein TP_0036 Treponema pallidum (strain Nichols)
O84072 2.42e-12 70 24 7 289 3 CT_069 Probable metal transport system membrane protein CT_069 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q89AJ1 2.72e-12 68 24 3 232 3 znuB High-affinity zinc uptake system membrane protein ZnuB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P39832 3.47e-12 68 25 3 236 1 znuB High-affinity zinc uptake system membrane protein ZnuB Escherichia coli (strain K12)
P96118 4.85e-12 68 26 5 283 3 troC Zinc transport system membrane protein TroC Treponema pallidum (strain Nichols)
P57402 7.21e-11 64 24 5 239 3 znuB High-affinity zinc uptake system membrane protein ZnuB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q9WXX9 7.98e-11 65 24 2 252 3 TM_0125 Probable metal transport system membrane protein TM_0125 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q9Z8J6 9.38e-11 65 23 7 297 3 CPn_0347 Probable metal transport system membrane protein CPn_0347/CP_0413/CPj0347/CpB0354 Chlamydia pneumoniae
Q8K9M7 1.28e-10 64 22 4 259 3 znuB High-affinity zinc uptake system membrane protein ZnuB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9PKX0 3.54e-10 63 23 6 290 3 TC_0341 Probable metal transport system membrane protein TC_0341 Chlamydia muridarum (strain MoPn / Nigg)
Q9PKW9 4.43e-10 63 23 4 266 3 TC_0342 Probable metal transport system membrane protein TC_0342 Chlamydia muridarum (strain MoPn / Nigg)
P44691 1.06e-09 61 25 5 239 3 znuB High-affinity zinc uptake system membrane protein ZnuB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O34610 1.62e-09 61 23 1 238 1 znuB High-affinity zinc uptake system membrane protein ZnuB Bacillus subtilis (strain 168)
O84073 5.65e-09 59 23 2 222 3 CT_070 Probable metal transport system membrane protein CT_070 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9Z8J7 2.45e-07 55 25 5 204 3 CPn_0346 Probable metal transport system membrane protein CPn_0346/CP_0414/CPj0346/CpB0353 Chlamydia pneumoniae
Q9PJX8 3.26e-07 54 23 9 274 3 TC_0698 Probable metal transport system membrane protein TC_0698 Chlamydia muridarum (strain MoPn / Nigg)
Q9Z809 1.03e-06 52 26 7 232 3 CPn_0543 Probable metal transport system membrane protein CPn_0543/CP_0209/CPj0543/CpB0565 Chlamydia pneumoniae
O84422 4.09e-06 51 22 10 287 3 CT_417 Probable metal transport system membrane protein CT_417 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04980
Feature type CDS
Gene -
Product metal ABC transporter permease
Location 1090271 - 1091182 (strand: -1)
Length 912 (nucleotides) / 303 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1815
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00950 ABC 3 transport family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1108 Inorganic ion transport and metabolism (P) P ABC-type Mn2+/Zn2+ transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11605 manganese/iron transport system permease protein ABC transporters -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG012585 iron/manganese ABC transporter permease subunit SitC VF1116 Nutritional/Metabolic factor

Protein Sequence

MLELLLQPFEYNYMVKAIWVSALVGAVCAFLSSYLILKGWSLMGDALSHSVVPGVAGAYILGLPYAVGAFFTGLLAALSMTFIRHITRLREDAVIGFIFSTFFAFGLLLVSLNPTAVNVQTIILGNILGIADEDVWQVVIITGVSFLILFCMWKDLLVVFFDEVHARSIGLSPLKLKIIFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDQFKRLAIIAICIGTVTSAVGAYLSYFFNGATGGVIVTMQTALFLLAFLFAPKHGMLAARRRARQSSQALISQSQHPKDVTQQEEVQL

Flanking regions ( +/- flanking 50bp)

GAACAACATACTCCCGCTCATCAAAGTAAGCGTAAACAAGGAGATTAGCCATGCTAGAATTACTCCTACAACCTTTTGAGTATAACTATATGGTAAAGGCTATCTGGGTAAGTGCCTTAGTTGGTGCTGTCTGTGCCTTTTTATCTTCTTACCTTATTCTTAAAGGTTGGTCATTAATGGGAGATGCCCTCTCCCACTCCGTCGTTCCCGGCGTTGCCGGTGCTTATATTTTAGGGTTGCCATACGCAGTGGGTGCTTTTTTTACGGGTCTACTTGCTGCTTTATCAATGACTTTTATTCGTCACATCACACGATTACGTGAAGATGCGGTGATTGGCTTTATTTTTTCTACTTTTTTTGCTTTTGGTCTGTTGCTGGTTTCATTAAACCCTACTGCCGTCAACGTTCAGACCATTATTTTAGGGAATATTCTCGGCATTGCTGATGAAGATGTCTGGCAAGTCGTTATCATTACTGGTGTCTCTTTTCTTATTCTATTTTGTATGTGGAAAGATTTATTAGTTGTATTTTTTGATGAAGTACATGCTCGCTCTATTGGTTTATCCCCTTTAAAACTAAAAATCATCTTCTTTACCTTGCTCAGTGCATGTACCGTTGCTGCGCTACAAACGGTCGGCGCTATTTTAGTTATTGCTATGGTGGTTACTCCCGGTGCTACCGCTTATTTACTCACTGACCAATTTAAACGACTCGCTATTATCGCTATTTGTATTGGTACAGTAACCAGTGCTGTTGGTGCTTATCTAAGTTATTTCTTTAATGGTGCTACGGGGGGCGTTATCGTCACAATGCAAACCGCCCTTTTCTTATTAGCCTTCTTATTTGCGCCTAAACATGGCATGTTGGCAGCCCGTCGCCGCGCACGTCAAAGTTCACAAGCACTTATTTCACAATCCCAGCATCCAAAAGACGTTACTCAACAAGAAGAGGTGCAACTATGAATGAATTAATGGAATTTTTCATTGAACCTTTTCAATATCCTTTTATGCAA