Homologs in group_2375

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18745 FBDBKF_18745 35.0 Morganella morganii S1 - Excisionase
EHELCC_15320 EHELCC_15320 35.0 Morganella morganii S2 - Excisionase
NLDBIP_15850 NLDBIP_15850 35.0 Morganella morganii S4 - Excisionase
LHKJJB_15990 LHKJJB_15990 35.0 Morganella morganii S3 - Excisionase
HKOGLL_15110 HKOGLL_15110 35.0 Morganella morganii S5 - Excisionase
PMI_RS04390 PMI_RS04390 35.0 Proteus mirabilis HI4320 - excisionase

Distribution of the homologs in the orthogroup group_2375

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2375

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75970 1.01e-27 98 52 0 80 4 xisE Prophage excisionase-like protein Escherichia coli (strain K12)
P27079 6.79e-10 53 32 0 74 4 xis Excisionase Enterobacteria phage P21

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04660
Feature type CDS
Gene -
Product excisionase
Location 1030446 - 1030688 (strand: -1)
Length 243 (nucleotides) / 80 (amino acids)
In genomic island GI56

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2375
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF07825 Excisionase-like protein

Protein Sequence

MKVLTLKEWSDKRYKSNPPSLTTLNKYARLGYFCPPARKEGRLWRVKEDADLVGIVATPSIKTFDDPILRKILKDERTTS

Flanking regions ( +/- flanking 50bp)

AAATGTAAATTAATACTTATTAACTAATTTTTATTATGCAAGGATGTATTATGAAAGTATTAACATTAAAGGAATGGTCGGATAAACGATATAAAAGTAACCCACCTTCTCTAACAACATTAAATAAATATGCACGATTAGGTTATTTTTGTCCCCCTGCAAGGAAAGAGGGCCGATTATGGCGAGTCAAAGAAGATGCTGATTTAGTTGGTATAGTTGCCACTCCTTCCATCAAAACATTCGATGACCCTATATTAAGGAAAATATTAAAAGATGAGCGGACGACCTCGTAAAAAGAATATTGATATACCCAATTTATATTCAATATATCATCCAAGGATGA