Homologs in group_3069

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18745 FBDBKF_18745 100.0 Morganella morganii S1 - Excisionase
EHELCC_15320 EHELCC_15320 100.0 Morganella morganii S2 - Excisionase
NLDBIP_15850 NLDBIP_15850 100.0 Morganella morganii S4 - Excisionase
HKOGLL_15110 HKOGLL_15110 100.0 Morganella morganii S5 - Excisionase
PMI_RS04390 PMI_RS04390 59.0 Proteus mirabilis HI4320 - excisionase

Distribution of the homologs in the orthogroup group_3069

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3069

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27079 1.03e-30 105 56 0 78 4 xis Excisionase Enterobacteria phage P21
P75970 2.08e-16 70 41 0 80 4 xisE Prophage excisionase-like protein Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_15990
Feature type CDS
Gene -
Product Excisionase
Location 89170 - 89421 (strand: -1)
Length 252 (nucleotides) / 83 (amino acids)

Contig

Accession ZDB_374
Length 116739 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3069
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF07825 Excisionase-like protein

Protein Sequence

MSRMVDLEAWAEHEFGDEAPSRRTLYKYAKSHMMVPPALKVGKKWMVDRDARYVGIISKPQLPGNSGDMLRRILSDGCETTLS

Flanking regions ( +/- flanking 50bp)

TTATAAAAAGTAACGGCTTTTTATTATCTAAATTGTGTGGAGAGAAAACTATGTCAAGAATGGTAGATCTTGAAGCGTGGGCAGAACATGAGTTTGGTGATGAGGCTCCGAGCAGGCGAACATTATATAAATATGCGAAATCTCACATGATGGTACCACCAGCTTTAAAAGTCGGTAAAAAATGGATGGTAGATCGTGACGCACGTTATGTCGGAATTATTTCGAAACCTCAATTACCGGGCAATTCTGGCGATATGTTAAGAAGGATTTTGTCTGATGGCTGCGAGACCACGCTCTCATAATATCATTGTCCCTAATTTGTACTGCAAACTTGATAAGCGAAACAACAAGA