Homologs in group_159

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9 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12405 FBDBKF_12405 46.7 Morganella morganii S1 ymfL YmfL family putative regulatory protein
FBDBKF_18725 FBDBKF_18725 43.4 Morganella morganii S1 ymfL YmfL family putative regulatory protein
EHELCC_15300 EHELCC_15300 43.4 Morganella morganii S2 ymfL YmfL family putative regulatory protein
EHELCC_19170 EHELCC_19170 42.8 Morganella morganii S2 ymfL YmfL family putative regulatory protein
NLDBIP_15830 NLDBIP_15830 43.4 Morganella morganii S4 ymfL YmfL family putative regulatory protein
NLDBIP_19140 NLDBIP_19140 42.8 Morganella morganii S4 ymfL YmfL family putative regulatory protein
LHKJJB_16010 LHKJJB_16010 43.4 Morganella morganii S3 ymfL YmfL family putative regulatory protein
LHKJJB_19030 LHKJJB_19030 42.8 Morganella morganii S3 ymfL YmfL family putative regulatory protein
HKOGLL_15130 HKOGLL_15130 43.4 Morganella morganii S5 ymfL YmfL family putative regulatory protein

Distribution of the homologs in the orthogroup group_159

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_159

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04450
Feature type CDS
Gene -
Product YmfL family putative regulatory protein
Location 991513 - 991971 (strand: 1)
Length 459 (nucleotides) / 152 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_159
Orthogroup size 10
N. genomes 6

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Genomic region

Domains

PF06892 Phage regulatory protein CII (CP76)

Protein Sequence

MSNQSIKQVVKEMCEATAGGREAMAGALGLSLTSFNNKLYEKNGCRSFDLNELLAMQDISKTVLFAEFIARESGMLLVERIKPDEIDEPELFRLHNKVGSKQGELAIFLEKSLEDGVVDSEEEKQLNVMLDRVIASGRAFVNAFISLHRKKK

Flanking regions ( +/- flanking 50bp)

CACGCAAGACTTTTTGCCAATGGCTGTGGTTTTAATAAAGAGAGGTATTTATGAGTAACCAATCAATAAAACAAGTAGTGAAAGAAATGTGTGAGGCAACAGCTGGTGGGCGTGAAGCGATGGCTGGTGCGCTTGGCCTGTCTTTAACATCATTCAATAACAAGCTGTATGAAAAAAACGGCTGTCGTTCATTTGATTTAAACGAACTGTTAGCCATGCAAGATATTTCTAAAACTGTTCTGTTTGCTGAATTCATTGCTCGTGAGTCTGGAATGTTGCTGGTGGAACGTATTAAACCCGACGAGATAGATGAACCTGAGTTATTTCGTCTACACAACAAAGTTGGTTCAAAACAAGGCGAACTGGCAATTTTTTTAGAAAAAAGTTTAGAGGATGGCGTTGTTGATAGTGAAGAAGAGAAACAACTTAACGTAATGCTAGATCGCGTAATAGCAAGTGGTCGTGCATTTGTTAATGCATTTATCTCATTACATCGGAAGAAAAAATAATGATGGGCTTTAGAAAGGGTGAAGCCAACGATGTACGGTCGCTGGCTTCG