Homologs in group_159

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9 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12405 FBDBKF_12405 76.6 Morganella morganii S1 ymfL YmfL family putative regulatory protein
FBDBKF_18725 FBDBKF_18725 100.0 Morganella morganii S1 ymfL YmfL family putative regulatory protein
EHELCC_15300 EHELCC_15300 100.0 Morganella morganii S2 ymfL YmfL family putative regulatory protein
EHELCC_19170 EHELCC_19170 99.4 Morganella morganii S2 ymfL YmfL family putative regulatory protein
NLDBIP_15830 NLDBIP_15830 100.0 Morganella morganii S4 ymfL YmfL family putative regulatory protein
NLDBIP_19140 NLDBIP_19140 99.4 Morganella morganii S4 ymfL YmfL family putative regulatory protein
LHKJJB_16010 LHKJJB_16010 100.0 Morganella morganii S3 ymfL YmfL family putative regulatory protein
LHKJJB_19030 LHKJJB_19030 99.4 Morganella morganii S3 ymfL YmfL family putative regulatory protein
PMI_RS04450 PMI_RS04450 43.4 Proteus mirabilis HI4320 - YmfL family putative regulatory protein

Distribution of the homologs in the orthogroup group_159

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_159

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_15130
Feature type CDS
Gene ymfL
Product YmfL family putative regulatory protein
Location 90219 - 90683 (strand: 1)
Length 465 (nucleotides) / 154 (amino acids)

Contig

Accession ZDB_694
Length 115897 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_159
Orthogroup size 10
N. genomes 6

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Genomic region

Domains

PF06892 Phage regulatory protein CII (CP76)

Protein Sequence

MKNESLKEVVKKMCCAMPGGREALAGALGMSLTTFNNNLYEKNGCRFFDNDELEAMEDLTKTRHLVEYHMDRHGITPMQDIDPDNIDQVELFDIRMTLAAAQAELELHIKKSLEDGKLTRDEVRGIYKKSGKVFSYFLGFVGSLDAVFGVPDEK

Flanking regions ( +/- flanking 50bp)

AAAACTATCTGACTTTGGTAACTACAACCCAACCTGAAAGCGAGTAGGCAATGAAAAACGAATCACTGAAAGAAGTAGTAAAAAAGATGTGCTGTGCCATGCCGGGTGGACGGGAAGCGCTGGCCGGTGCGCTGGGGATGTCACTGACGACATTCAACAACAACCTGTACGAGAAGAACGGCTGCCGGTTTTTCGACAATGACGAGCTGGAAGCAATGGAAGATCTGACCAAAACCCGTCACCTGGTAGAATATCACATGGATCGGCACGGTATTACGCCGATGCAGGACATAGACCCTGACAACATTGATCAGGTTGAGCTGTTTGATATCCGCATGACCCTTGCGGCGGCACAGGCAGAGCTGGAATTACATATTAAGAAAAGCCTGGAAGACGGGAAGTTAACCCGTGATGAGGTCAGGGGGATTTATAAAAAATCAGGGAAAGTATTTTCTTACTTTTTGGGATTTGTCGGGAGTCTTGACGCTGTATTCGGGGTTCCGGATGAAAAGTGAGACCACCGGTATACGGCCGGTGGCCTCGGTCGCGCCATATCAATTGTGTG