Homologs in group_1782

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12990 FBDBKF_12990 47.4 Morganella morganii S1 pepD C69 family dipeptidase
EHELCC_06305 EHELCC_06305 47.4 Morganella morganii S2 pepD C69 family dipeptidase
NLDBIP_06625 NLDBIP_06625 47.4 Morganella morganii S4 pepD C69 family dipeptidase
LHKJJB_03505 LHKJJB_03505 47.4 Morganella morganii S3 pepD C69 family dipeptidase
HKOGLL_06980 HKOGLL_06980 47.4 Morganella morganii S5 pepD C69 family dipeptidase
F4V73_RS16175 F4V73_RS16175 46.2 Morganella psychrotolerans - C69 family dipeptidase

Distribution of the homologs in the orthogroup group_1782

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1782

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O85304 6.31e-136 402 51 8 391 3 pipD Probable dipeptidase Salmonella dublin
Q48841 2.56e-73 242 32 12 470 3 None Probable dipeptidase Latilactobacillus sakei
P0DD25 5.94e-64 218 30 12 471 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DD24 5.94e-64 218 30 12 471 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q9CFC3 7.35e-63 215 31 11 436 3 pepDB Probable dipeptidase B Lactococcus lactis subsp. lactis (strain IL1403)
Q8P1N3 1.96e-62 214 30 12 471 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M18 (strain MGAS8232)
Q5XD16 6.29e-62 212 30 12 471 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q9A0M0 6.48e-62 212 30 12 471 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M1
Q9CIV4 1.75e-58 203 31 8 383 3 pepDA Probable dipeptidase A Lactococcus lactis subsp. lactis (strain IL1403)
Q8G6Z9 1.77e-56 199 33 12 423 1 pepD Dipeptidase Bifidobacterium longum (strain NCC 2705)
Q99XS1 1.29e-51 186 28 11 469 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M1
P0DD27 4.9e-50 181 28 12 470 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DD26 4.9e-50 181 28 12 470 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q8NZ57 1.31e-49 180 28 12 470 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M18 (strain MGAS8232)
Q5X9M0 1.78e-49 180 28 12 470 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q48558 3.28e-48 176 26 14 470 1 pepDA Dipeptidase A Lactobacillus helveticus
Q17QS0 3.81e-06 52 24 13 251 2 SCRN3 Secernin-3 Bos taurus
Q803W1 4.01e-06 52 24 12 247 2 scrn3 Secernin-3 Danio rerio
Q0VDG4 6.55e-05 48 25 13 255 1 SCRN3 Secernin-3 Homo sapiens
Q9CZC8 0.000225 47 25 12 225 1 Scrn1 Secernin-1 Mus musculus
Q12765 0.000273 47 24 10 217 1 SCRN1 Secernin-1 Homo sapiens
P83939 0.000387 46 26 11 221 1 SCRN1 Secernin-1 Bos taurus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03945
Feature type CDS
Gene -
Product C69 family dipeptidase
Location 888825 - 890321 (strand: 1)
Length 1497 (nucleotides) / 498 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1782
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03577 Peptidase family C69

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4690 Amino acid transport and metabolism (E) E Dipeptidase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08659 dipeptidase [EC:3.4.-.-] - -

Protein Sequence

MFLFKKAVIALSINIALVSSALACTTLLAGSEATNDGSLIVARSADSDALKAQHFVIHPAKNNQTGIYSTQAHHGANSFTYPLPKHSLRYTTVPNWKTQLHGATGFNELGVGVSGTESIFASPKALAFDPYVEDTGITEDDIPDILLSRAKTAREAIELLGNIIETQGAGEGFGVAVVDKNEVWYLETGTGHQWMAQKLPKDKYFATGNQGRLQAYHTDSNDNLGSKNLVEFAIEKGLYDPATDGEFNFSKAYTRDDERDLTYNYPRVWVIQQQFNPSLKQNVADGRQFAPMLTPEKKVSVEDAKAMLRNHFDGTEHDPYTNGLNGNEPWRPISVFRTYESHVMQVRPELPQEIGEVTYVGLGMADLTAFVPYYSGLKAYPQHYAIGTDKADNDSIYWKYRKLQTLVMTDYPQFAPIVKKAYQEWEAKTALEQKEMEANYLSMSKKNKAAADNMLNEFNLRVMADAEQLTENLTNQLFTLKTKNIQDEIFFANQSKKD

Flanking regions ( +/- flanking 50bp)

GATAATTAATTGAGATATAAATTATAAATAACAAGCAAATGAGGCATTATATGTTTTTATTTAAAAAAGCTGTTATCGCTTTGTCAATTAATATCGCATTAGTTTCTTCGGCTCTGGCCTGCACAACGTTATTAGCAGGGAGTGAAGCAACTAATGATGGCTCTTTGATTGTAGCTCGTAGCGCAGATAGTGATGCTTTAAAAGCACAACATTTTGTTATTCATCCAGCCAAAAATAATCAGACTGGTATTTATAGCACTCAAGCCCATCATGGCGCTAATAGCTTTACTTATCCACTACCTAAACACTCATTACGTTATACCACTGTACCTAATTGGAAAACTCAATTGCATGGTGCAACGGGTTTTAATGAGCTAGGCGTTGGGGTGAGTGGTACAGAATCCATTTTTGCCTCACCTAAAGCATTGGCGTTCGATCCTTATGTTGAAGATACGGGGATCACTGAAGATGATATTCCAGATATTTTACTCTCAAGGGCAAAAACTGCCCGTGAAGCAATTGAATTACTGGGAAACATCATCGAAACACAAGGTGCGGGAGAAGGATTTGGGGTTGCCGTCGTTGATAAAAATGAGGTGTGGTACCTAGAAACAGGTACAGGTCATCAATGGATGGCGCAAAAACTACCAAAAGATAAATATTTTGCAACGGGTAATCAAGGGCGTTTACAGGCTTACCATACAGATAGTAATGATAATTTAGGTTCTAAAAACTTAGTTGAGTTTGCAATAGAAAAAGGACTTTATGATCCTGCCACTGATGGCGAATTTAATTTTTCTAAAGCCTATACGCGTGATGATGAACGTGATCTCACTTATAATTACCCGAGGGTTTGGGTTATCCAGCAACAATTTAACCCTTCTCTGAAACAGAATGTGGCAGATGGTCGTCAATTTGCGCCTATGCTGACACCGGAGAAAAAAGTATCAGTAGAAGACGCCAAAGCGATGTTACGCAACCATTTTGACGGTACAGAACATGATCCTTATACCAATGGATTGAATGGCAATGAACCATGGCGACCAATAAGTGTGTTTCGTACTTATGAATCTCATGTGATGCAAGTAAGACCTGAATTACCGCAAGAGATTGGTGAAGTGACTTATGTTGGTTTGGGAATGGCTGATCTAACCGCTTTTGTTCCTTATTACAGTGGATTAAAAGCATATCCGCAACACTATGCTATTGGAACAGATAAAGCAGATAATGACTCTATCTATTGGAAATATCGTAAGTTACAAACATTAGTAATGACAGATTATCCTCAATTTGCTCCTATTGTTAAAAAAGCATACCAAGAATGGGAAGCTAAAACAGCATTAGAACAAAAAGAAATGGAGGCTAACTATTTGTCAATGAGTAAAAAGAATAAAGCAGCAGCGGATAACATGCTGAATGAATTTAACTTACGTGTAATGGCTGATGCAGAGCAATTAACTGAAAACTTAACTAATCAACTCTTTACTCTTAAAACTAAAAATATACAAGATGAGATCTTTTTTGCTAATCAATCTAAAAAAGATTAATTACTTTAACATATTATAAATATTAAAAAGATCTCAAGATGCGTAATCAG