COG4690


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4690, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Dipeptidase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG4690 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1782 FBDBKF_12990 97698 99182 -1 pepD C69 family dipeptidase Morganella morganii S1
1 group_1782 EHELCC_06305 267730 269214 -1 pepD C69 family dipeptidase Morganella morganii S2
2 group_1782 NLDBIP_06625 308795 310279 -1 pepD C69 family dipeptidase Morganella morganii S4
3 group_1782 LHKJJB_03505 286319 287803 -1 pepD C69 family dipeptidase Morganella morganii S3
4 group_1782 HKOGLL_06980 208183 209667 -1 pepD C69 family dipeptidase Morganella morganii S5
5 group_1782 F4V73_RS16175 38042 39526 -1 C69 family dipeptidase Morganella psychrotolerans
6 group_1782 PMI_RS03945 888825 890321 1 C69 family dipeptidase Proteus mirabilis HI4320