Homologs in group_1782

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12990 FBDBKF_12990 100.0 Morganella morganii S1 pepD C69 family dipeptidase
EHELCC_06305 EHELCC_06305 100.0 Morganella morganii S2 pepD C69 family dipeptidase
LHKJJB_03505 LHKJJB_03505 100.0 Morganella morganii S3 pepD C69 family dipeptidase
HKOGLL_06980 HKOGLL_06980 100.0 Morganella morganii S5 pepD C69 family dipeptidase
F4V73_RS16175 F4V73_RS16175 95.3 Morganella psychrotolerans - C69 family dipeptidase
PMI_RS03945 PMI_RS03945 47.4 Proteus mirabilis HI4320 - C69 family dipeptidase

Distribution of the homologs in the orthogroup group_1782

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1782

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O85304 8.15e-136 402 53 5 375 3 pipD Probable dipeptidase Salmonella dublin
Q48841 3.06e-82 265 37 10 421 3 None Probable dipeptidase Latilactobacillus sakei
Q5XD16 5.8e-70 233 32 11 480 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8P1N3 9.52e-70 233 32 11 480 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M18 (strain MGAS8232)
P0DD25 7.5e-69 230 32 11 480 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DD24 7.5e-69 230 32 11 480 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q9A0M0 3.64e-68 229 32 11 480 3 pepDA Probable dipeptidase A Streptococcus pyogenes serotype M1
Q9CFC3 5.23e-65 221 35 12 386 3 pepDB Probable dipeptidase B Lactococcus lactis subsp. lactis (strain IL1403)
Q9CIV4 2.13e-62 213 35 10 358 3 pepDA Probable dipeptidase A Lactococcus lactis subsp. lactis (strain IL1403)
Q99XS1 3.2e-61 211 33 11 465 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M1
Q5X9M0 5e-60 208 33 12 466 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8NZ57 6.29e-60 207 33 12 466 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M18 (strain MGAS8232)
P0DD27 7.28e-60 207 33 12 466 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DD26 7.28e-60 207 33 12 466 3 pepDB Probable dipeptidase B Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q8G6Z9 5.63e-59 206 33 13 429 1 pepD Dipeptidase Bifidobacterium longum (strain NCC 2705)
Q48558 8.64e-57 199 32 12 431 1 pepDA Dipeptidase A Lactobacillus helveticus

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06625
Feature type CDS
Gene pepD
Product C69 family dipeptidase
Location 308795 - 310279 (strand: -1)
Length 1485 (nucleotides) / 494 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1782
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03577 Peptidase family C69

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4690 Amino acid transport and metabolism (E) E Dipeptidase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08659 dipeptidase [EC:3.4.-.-] - -

Protein Sequence

MKRSVLSLAVGAALVISDATACTTIFVGENASSDGAQYIARNEDMNPANPKVLQVNQEKVNKDTEFKTNLNKFTYTLPEKAMRYTTIPEWNDKGQFRFSSNGFNDAGVGISATETIFANEASLKIDPYVEDTGIIEDAIPDVVLPYVSSAKEGVMRLGKIIEEKGAGEGFGVAFIDKDGIWYLETGSGHQWMAAKIPANTYYVTANQGRLEKFDMNDKENYLSSPTLISFAEKNGLYDPKKDGEFNFKKAYTKDDAKSDGYYNYPRVLVLQKMYNPEIKTDFKDVKSNDFPVFLKPAKKLGLEDIKAGLRNHYENVGTSPYATNYPDTTKRPISVFRTQHSHILQVRKDLPKEIGNVRYIAFGMPTLSVYVPVYYGPDSYVEAYTIGSPQADNASAHWKFRKLQTLAMIDFNKYSKIVQAEYSKQEAEFAKEQQAMEKEYLSIYKTDPAKAKQLLQDFQNKVMQDALNTTDKLTNIIMQDLTNSVNERYRFKGA

Flanking regions ( +/- flanking 50bp)

GGTAATGGATAGCGTAAGCGCAATTTATAACTCAATGGAAGGTGTTCTCTATGAAACGTAGTGTTTTATCGCTTGCTGTGGGTGCTGCACTGGTGATTTCTGATGCAACGGCGTGTACCACTATTTTTGTCGGTGAAAATGCGTCTTCAGATGGTGCGCAATATATTGCCCGCAATGAAGATATGAATCCGGCAAACCCGAAAGTTTTGCAGGTGAATCAGGAAAAAGTAAATAAAGACACTGAGTTTAAAACCAACTTAAATAAATTCACCTATACCCTGCCGGAAAAGGCAATGCGTTATACCACTATCCCGGAATGGAATGATAAAGGTCAGTTCCGTTTCAGTTCTAACGGCTTTAATGACGCCGGTGTCGGGATCAGTGCCACAGAAACGATTTTCGCCAATGAAGCTTCATTAAAAATTGACCCGTATGTTGAAGATACCGGGATTATTGAAGATGCGATTCCGGATGTGGTATTACCGTATGTCTCTTCCGCAAAAGAAGGGGTGATGCGGTTAGGGAAAATCATTGAGGAAAAAGGGGCCGGTGAAGGTTTCGGCGTGGCCTTTATTGATAAAGACGGGATCTGGTATCTGGAAACCGGCAGCGGCCACCAGTGGATGGCAGCAAAAATCCCGGCCAATACCTATTACGTCACCGCAAACCAGGGCCGCCTGGAAAAATTTGATATGAATGACAAAGAAAATTACCTGTCATCCCCGACACTGATTTCCTTTGCCGAGAAAAATGGCTTATATGATCCGAAAAAAGACGGTGAGTTTAATTTCAAAAAAGCCTATACCAAAGATGACGCAAAAAGTGACGGTTATTACAACTATCCGCGAGTGTTAGTCCTGCAGAAAATGTATAACCCGGAAATTAAAACTGACTTTAAAGATGTGAAATCCAATGATTTCCCTGTCTTCTTAAAACCGGCGAAAAAACTGGGGCTGGAAGATATTAAAGCAGGGCTGCGCAACCATTATGAGAATGTCGGCACATCCCCGTATGCAACCAACTATCCGGATACCACTAAACGACCAATCTCGGTATTCAGAACCCAGCACTCCCATATTTTACAGGTGCGCAAAGATTTACCGAAAGAAATCGGGAATGTCCGTTATATTGCCTTCGGTATGCCGACATTATCCGTTTATGTCCCGGTATATTACGGCCCGGACAGCTATGTGGAAGCTTATACCATCGGTTCACCACAGGCGGATAATGCCTCCGCGCACTGGAAATTCCGTAAATTACAGACGCTGGCAATGATCGACTTTAATAAATATTCGAAAATTGTGCAGGCGGAATACAGCAAACAGGAAGCTGAGTTTGCCAAAGAACAACAGGCAATGGAAAAAGAGTATCTGAGTATTTATAAAACAGACCCGGCGAAAGCCAAACAGCTGTTACAGGACTTCCAGAATAAAGTCATGCAGGATGCATTAAATACCACCGATAAACTGACCAATATTATTATGCAGGATTTGACCAATTCCGTGAACGAACGCTACCGCTTTAAAGGCGCGTGATGCGGGAGTACATAAAAAACGGCCTCTGTTACCAGAGGCCGTTTTGAGAT