Homologs in group_1266

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07385 FBDBKF_07385 81.7 Morganella morganii S1 tusE sulfurtransferase TusE
EHELCC_03585 EHELCC_03585 81.7 Morganella morganii S2 tusE sulfurtransferase TusE
NLDBIP_03585 NLDBIP_03585 81.7 Morganella morganii S4 tusE sulfurtransferase TusE
LHKJJB_09415 LHKJJB_09415 81.7 Morganella morganii S3 tusE sulfurtransferase TusE
HKOGLL_09560 HKOGLL_09560 81.7 Morganella morganii S5 tusE sulfurtransferase TusE
F4V73_RS01575 F4V73_RS01575 77.1 Morganella psychrotolerans - TusE/DsrC/DsvC family sulfur relay protein

Distribution of the homologs in the orthogroup group_1266

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1266

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N5Z1 2e-61 186 77 0 109 3 tusE Sulfurtransferase TusE Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q8ZG65 2.32e-60 182 76 0 109 3 tusE Sulfurtransferase TusE Yersinia pestis
Q66CD8 7.59e-60 181 77 0 106 3 tusE Sulfurtransferase TusE Yersinia pseudotuberculosis serotype I (strain IP32953)
Q32HT7 2.27e-58 177 71 0 109 3 tusE Sulfurtransferase TusE Shigella dysenteriae serotype 1 (strain Sd197)
Q6D6C3 5.01e-58 177 73 0 109 3 tusE Sulfurtransferase TusE Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q3Z3F2 5.35e-58 177 71 0 109 3 tusE Sulfurtransferase TusE Shigella sonnei (strain Ss046)
P0AB19 5.35e-58 177 71 0 109 3 tusE Sulfurtransferase TusE Shigella flexneri
Q31YN2 5.35e-58 177 71 0 109 3 tusE Sulfurtransferase TusE Shigella boydii serotype 4 (strain Sb227)
P0AB18 5.35e-58 177 71 0 109 1 tusE Sulfurtransferase TusE Escherichia coli (strain K12)
Q8XD82 5.35e-58 177 71 0 109 3 tusE Sulfurtransferase TusE Escherichia coli O157:H7
Q8FJ69 7.2e-58 176 71 0 109 3 tusE Sulfurtransferase TusE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q7CQS8 2.6e-57 175 70 0 109 3 tusE Sulfurtransferase TusE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XEZ7 2.6e-57 175 70 0 109 3 tusE Sulfurtransferase TusE Salmonella typhi
Q5PGB9 2.6e-57 175 70 0 109 3 tusE Sulfurtransferase TusE Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57QR9 1.35e-56 173 69 0 109 3 tusE Sulfurtransferase TusE Salmonella choleraesuis (strain SC-B67)
Q2NU63 5.16e-51 159 65 0 106 3 tusE Sulfurtransferase TusE Sodalis glossinidius (strain morsitans)
P45184 6.93e-50 156 65 0 109 3 tusE Sulfurtransferase TusE homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8K998 4.07e-38 127 50 0 103 3 tusE Sulfurtransferase TusE Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57539 8.2e-38 126 48 0 107 3 tusE Sulfurtransferase TusE Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AA8 6.48e-28 100 51 1 89 3 tusE Sulfurtransferase TusE Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P45573 5.17e-17 73 34 2 108 1 dsvC Sulfite reductase, dissimilatory-type subunit gamma Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03900
Feature type CDS
Gene tusE
Product sulfurtransferase TusE
Location 882527 - 882856 (strand: -1)
Length 330 (nucleotides) / 109 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1266
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04358 DsrC like protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2920 Translation, ribosomal structure and biogenesis (J) J Sulfur transfer complex TusBCD TusE component, DsrC family (tRNA 2-thiouridine synthesizing protein C)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Sulfur relay system -

Protein Sequence

MFVFNGQQIETDSHGYLKNSNEWTEEMVPILAELEEIELTEQHWEIIRFVRQFYLEFNTSPAIRMLVKALAQKYGDEKGNSRYLYRLFPKGPAKQATKLAGLPKPVKCI

Flanking regions ( +/- flanking 50bp)

GCGGTTATTTTTGCTAAATTAAATGATTATTTTTGATTGGTTAGAAACACATGTTTGTATTTAACGGACAACAAATCGAGACAGATAGTCACGGTTATTTAAAAAACAGCAATGAATGGACCGAAGAGATGGTGCCAATATTAGCTGAACTTGAAGAAATTGAACTCACAGAGCAACATTGGGAAATTATCCGTTTTGTGCGCCAGTTTTATTTAGAATTTAATACCTCACCGGCGATCCGAATGTTAGTGAAAGCATTAGCACAAAAATATGGCGATGAAAAAGGCAATAGCCGTTATCTATATCGCTTATTCCCTAAAGGTCCTGCTAAACAGGCAACGAAGCTCGCGGGCTTACCTAAACCTGTCAAATGTATTTAATACTAAGATGCATAATGGCGGATTGAAAAGTCTGCCATTTCTTCATATTG