Homologs in group_1320

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07350 FBDBKF_07350 35.7 Morganella morganii S1 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
EHELCC_03620 EHELCC_03620 35.7 Morganella morganii S2 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
NLDBIP_03620 NLDBIP_03620 35.7 Morganella morganii S4 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
LHKJJB_09450 LHKJJB_09450 35.7 Morganella morganii S3 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
HKOGLL_09525 HKOGLL_09525 35.7 Morganella morganii S5 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
F4V73_RS01535 F4V73_RS01535 37.7 Morganella psychrotolerans - TfoX/Sxy family DNA transformation protein

Distribution of the homologs in the orthogroup group_1320

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1320

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75869 2.35e-31 116 34 1 187 1 sxy Protein Sxy Escherichia coli (strain K12)
Q5E4H8 6.47e-28 107 32 3 180 3 tfoY DNA transformation protein TfoY Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q5E6F5 6.87e-19 84 28 5 198 2 tfoX1 DNA transformation protein TfoX1 Aliivibrio fischeri (strain ATCC 700601 / ES114)
P43779 7.44e-07 51 27 5 182 1 tfoX DNA transformation protein TfoX Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03865
Feature type CDS
Gene -
Product TfoX/Sxy family DNA transformation protein
Location 875554 - 876168 (strand: 1)
Length 615 (nucleotides) / 204 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1320
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04993 TfoX N-terminal domain
PF04994 TfoX C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3070 Transcription (K) K Transcriptional regulator of competence genes, TfoX/Sxy family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07343 DNA transformation protein and related proteins - -

Protein Sequence

MSILPEQRKAHLLSRVAEYGKLSKKSQFGGYSLMVDEVIFAITADNEFYLKGSGFVETLYKANNMDAYVYLKKGIPITLRYYRITQAIWHNSAKLNQYIDFAYHYSTQEFLGQQKQPRRIKDLPNLGIALEKKLNQVGINRIEELRTIGAKACYLKLIAQPKQGNSDLLLALAGAIVGCHRSVLPNQLKMELLNWYKELSVKSY

Flanking regions ( +/- flanking 50bp)

ATATATTTGAATTTTAAGATAAAAAATATTTTTTGTGGTTTGGAGATCTGATGTCAATTTTACCTGAGCAAAGGAAGGCTCATTTATTATCGCGCGTAGCGGAATATGGAAAGTTAAGTAAGAAGTCTCAATTCGGCGGTTATAGCTTAATGGTTGATGAGGTTATCTTTGCGATTACTGCTGATAATGAATTTTATTTAAAAGGGAGTGGTTTTGTTGAAACACTCTATAAAGCAAACAACATGGATGCATACGTCTATCTAAAAAAAGGTATCCCCATTACATTGCGCTATTATCGTATTACGCAAGCAATATGGCATAATAGCGCTAAGCTCAATCAATATATCGATTTTGCATATCACTATAGTACTCAGGAGTTTTTAGGGCAGCAAAAGCAGCCTCGTCGTATCAAAGATTTACCCAATTTGGGCATAGCATTAGAGAAAAAGCTGAATCAAGTTGGGATTAACCGTATCGAGGAATTACGTACGATCGGTGCGAAGGCATGTTATTTAAAACTGATTGCGCAACCTAAGCAAGGAAATAGCGACTTATTGCTTGCGTTAGCAGGTGCTATTGTTGGCTGTCATCGGTCTGTGTTACCTAATCAATTAAAAATGGAATTGTTAAATTGGTATAAAGAGTTATCCGTTAAATCCTATTAAACTACAGTACTCGGACTTGAGTACATTAGAATGAACAGGAATAACGGAAT