Homologs in group_1320

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07350 FBDBKF_07350 100.0 Morganella morganii S1 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
EHELCC_03620 EHELCC_03620 100.0 Morganella morganii S2 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
NLDBIP_03620 NLDBIP_03620 100.0 Morganella morganii S4 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
LHKJJB_09450 LHKJJB_09450 100.0 Morganella morganii S3 tfoX Transcriptional regulator of competence genes, TfoX/Sxy family
F4V73_RS01535 F4V73_RS01535 88.7 Morganella psychrotolerans - TfoX/Sxy family DNA transformation protein
PMI_RS03865 PMI_RS03865 35.7 Proteus mirabilis HI4320 - TfoX/Sxy family DNA transformation protein

Distribution of the homologs in the orthogroup group_1320

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1320

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75869 1.33e-24 99 34 5 192 1 sxy Protein Sxy Escherichia coli (strain K12)
Q5E4H8 1.06e-19 85 30 3 177 3 tfoY DNA transformation protein TfoY Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q5E6F5 1.64e-13 69 25 4 200 2 tfoX1 DNA transformation protein TfoX1 Aliivibrio fischeri (strain ATCC 700601 / ES114)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_09525
Feature type CDS
Gene tfoX
Product Transcriptional regulator of competence genes, TfoX/Sxy family
Location 159267 - 159878 (strand: 1)
Length 612 (nucleotides) / 203 (amino acids)
In genomic island -

Contig

Accession ZDB_686
Length 191111 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1320
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04993 TfoX N-terminal domain
PF04994 TfoX C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3070 Transcription (K) K Transcriptional regulator of competence genes, TfoX/Sxy family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07343 DNA transformation protein and related proteins - -

Protein Sequence

MKDYLKLSDVQFDRLQHSTQPFGRIRLKSQFGCMGLSIDRVTFALIANSQLWLKSTEATRELFCRLELSDRFTYPKRILPMRINYYRVPDAVWQCPQQSEFLFYQTYLHAREHAQSQQQLPSRIKDLPNVDRALERRLWQAGIRRVDDLYLLGAKASFLKVKARPQNELKLLFAIAGAIEGCHSAVLPKALREDLIHWHGRLN

Flanking regions ( +/- flanking 50bp)

TAGGGAATGACACAACGATACGTTTAACCTGCTTTCAAAGGACTGATAATATGAAGGATTATTTGAAATTGTCAGATGTTCAGTTTGATCGTCTTCAACACAGCACACAGCCGTTCGGCCGGATCCGCCTGAAGTCACAGTTCGGGTGTATGGGATTATCCATTGACCGGGTCACTTTCGCACTGATAGCCAACAGTCAGCTCTGGCTGAAAAGCACAGAGGCCACCCGCGAGCTGTTCTGCCGGCTGGAACTGAGTGACCGGTTTACTTATCCCAAGCGGATCCTGCCAATGCGGATTAACTATTACCGTGTTCCGGACGCGGTATGGCAGTGCCCTCAGCAGAGTGAGTTCCTTTTTTACCAGACCTACCTGCATGCACGGGAACATGCACAGTCACAGCAGCAACTGCCGTCGCGGATTAAAGATCTGCCGAATGTGGACAGAGCTCTGGAACGCCGCTTATGGCAGGCGGGGATCCGCCGGGTGGATGACCTCTATTTGCTGGGTGCCAAAGCGAGCTTTCTGAAGGTCAAAGCCCGGCCGCAGAATGAGCTGAAATTACTGTTTGCCATCGCGGGAGCCATTGAGGGGTGCCACAGCGCGGTATTACCGAAAGCACTGCGGGAGGATCTTATTCACTGGCACGGCCGGCTGAACTAAACGGTCCGGCCATCCCGGGGAAACGTTTTTCTCCCCGGGATGAAGTCAGC