Homologs in group_185

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07340 FBDBKF_07340 81.1 Morganella morganii S1 ompA porin OmpA
FBDBKF_20375 FBDBKF_20375 40.2 Morganella morganii S1 ompA OmpA family protein
EHELCC_03630 EHELCC_03630 81.1 Morganella morganii S2 ompA porin OmpA
NLDBIP_03630 NLDBIP_03630 81.1 Morganella morganii S4 ompA porin OmpA
LHKJJB_09460 LHKJJB_09460 81.1 Morganella morganii S3 ompA porin OmpA
HKOGLL_09515 HKOGLL_09515 81.1 Morganella morganii S5 ompA porin OmpA
F4V73_RS01525 F4V73_RS01525 78.9 Morganella psychrotolerans ompA porin OmpA
F4V73_RS19125 F4V73_RS19125 36.6 Morganella psychrotolerans - OmpA family protein

Distribution of the homologs in the orthogroup group_185

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_185

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P38399 4.68e-177 498 68 4 361 1 ompA Outer membrane protein A Yersinia pseudotuberculosis serotype I (strain IP32953)
Q8ZG77 4.68e-177 498 68 4 361 1 ompA Outer membrane protein A Yersinia pestis
I2BAK7 9.27e-174 490 70 3 360 3 ompA Outer membrane protein A Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)
P0A910 8.15e-171 482 68 4 362 1 ompA Outer membrane protein A Escherichia coli (strain K12)
P0A911 8.15e-171 482 68 4 362 3 ompA Outer membrane protein A Escherichia coli O157:H7
P09146 1.51e-170 481 69 5 361 3 ompA Outer membrane protein A Klebsiella aerogenes
B7LNW7 1.84e-170 481 68 3 360 3 ompA Outer membrane protein A Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P02935 4.61e-170 480 68 3 360 3 ompA Outer membrane protein A Shigella dysenteriae
Q8Z7S0 6.38e-170 480 67 3 360 3 ompA Outer membrane protein A Salmonella typhi
A0A2S4N3N0 8.91e-170 479 67 3 360 1 ompA Outer membrane protein A Shigella flexneri
P02936 7.74e-169 477 67 3 360 3 ompA Outer membrane protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P04845 4.91e-167 473 68 4 364 3 ompA Outer membrane protein A Serratia marcescens
P24017 2.5e-165 468 70 3 340 1 ompA Outer membrane protein A Klebsiella pneumoniae
P0DJO6 2.01e-111 327 69 3 248 3 ompA Outer membrane protein A (Fragment) Shimwellia blattae
P24016 8.45e-111 326 66 2 248 3 ompA Outer membrane protein A (Fragment) Citrobacter freundii
P0C8Z2 8.91e-110 323 68 2 248 3 ompA Outer membrane protein A (Fragment) Escherichia fergusonii
P24754 2.62e-108 320 63 2 248 3 ompA Outer membrane protein A (Fragment) Atlantibacter hermannii
P24755 2.09e-89 271 56 4 250 3 ompA Outer membrane protein A (Fragment) Serratia odorifera
P38368 1.92e-75 239 43 10 369 1 ompA Outer membrane protein P5 Haemophilus influenzae
P43840 3.81e-74 236 43 12 374 3 ompA Outer membrane protein P5 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45996 5.83e-73 233 42 10 372 1 ompA Outer membrane protein P5 Haemophilus influenzae
P57414 7.69e-61 202 30 7 357 3 ompA Outer membrane protein A Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9L4 3.15e-56 190 32 9 362 3 ompA Outer membrane protein A Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P07050 6.66e-24 101 35 4 196 3 None Outer membrane protein P.III Neisseria gonorrhoeae
Q05146 5.6e-22 95 41 3 136 3 ompA Outer membrane protein A Bordetella avium
P0A0V3 3.34e-20 91 36 2 151 1 rmpM Outer membrane protein class 4 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P0A0V2 6.14e-20 90 36 2 151 3 rmpM Outer membrane protein class 4 Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q6RYW5 7.05e-13 72 26 12 349 1 omp38 Outer membrane protein Omp38 Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
A3M8K2 2.67e-12 70 26 12 349 3 omp38 Outer membrane protein Omp38 Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P37665 6.23e-11 65 33 2 124 1 yiaD Probable lipoprotein YiaD Escherichia coli (strain K12)
Q7NFT5 7.48e-11 67 33 5 140 1 psaB Photosystem I P700 chlorophyll a apoprotein A2 Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
P9WIU5 1.86e-10 65 34 2 114 1 arfA Peptidoglycan-binding protein ArfA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIU4 1.86e-10 65 34 2 114 3 arfA Peptidoglycan-binding protein ArfA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A1KH31 1.86e-10 65 34 2 114 1 arfA Peptidoglycan-binding protein ArfA Mycobacterium bovis (strain BCG / Pasteur 1173P2)
P65594 1.86e-10 65 34 2 114 3 arfA Peptidoglycan-binding protein ArfA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P13794 4.9e-10 63 26 7 228 1 oprF Outer membrane porin F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A160PB22 1.16e-09 62 42 1 78 1 tpgA Trimeric autotransporter adhesin- and peptidoglycan-associated protein A Acinetobacter sp. (strain Tol 5)
Q9I4Z4 2.11e-08 56 38 1 84 3 pal Peptidoglycan-associated lipoprotein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A3S8 1.11e-07 54 30 2 92 1 pal Peptidoglycan-associated lipoprotein Brucella suis biovar 1 (strain 1330)
P0A3S7 1.11e-07 54 30 2 92 1 pal Peptidoglycan-associated lipoprotein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P0A3S9 1.11e-07 54 30 2 92 1 pal Peptidoglycan-associated lipoprotein Brucella abortus biovar 1 (strain 9-941)
Q9I4L6 1.29e-07 54 34 1 95 1 yfiB Outer-membrane lipoprotein YfiB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A139 1.51e-07 53 37 2 88 3 pal Peptidoglycan-associated lipoprotein Pseudomonas putida
P0A138 1.51e-07 53 37 2 88 3 pal Peptidoglycan-associated lipoprotein Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q98F85 1.75e-07 53 30 3 126 3 pal Peptidoglycan-associated lipoprotein Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q926C3 5.18e-07 52 33 4 109 3 pal Peptidoglycan-associated lipoprotein Rhizobium meliloti (strain 1021)
P37726 7.15e-07 53 31 2 120 1 oprF Outer membrane porin F Pseudomonas fluorescens
Q9S3R9 7.63e-07 54 33 3 106 1 PG_0695 Outer membrane protein 41 Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q51886 7.85e-06 48 34 2 85 3 pal Peptidoglycan-associated lipoprotein Pasteurella multocida (strain Pm70)
P07021 9.62e-06 48 31 3 119 3 yfiB Putative lipoprotein YfiB Escherichia coli (strain K12)
P22263 1.24e-05 50 30 5 148 3 oprF Outer membrane porin F Pseudomonas syringae pv. syringae
P0A914 1.3e-05 48 35 2 85 3 pal Peptidoglycan-associated lipoprotein Shigella flexneri
P0A912 1.3e-05 48 35 2 85 1 pal Peptidoglycan-associated lipoprotein Escherichia coli (strain K12)
P0A913 1.3e-05 48 35 2 85 3 pal Peptidoglycan-associated lipoprotein Escherichia coli O157:H7
Q9S3P9 1.5e-05 49 35 1 84 3 motY Sodium-type flagellar protein MotY Vibrio anguillarum
P26493 1.72e-05 48 34 2 84 3 pal Peptidoglycan-associated lipoprotein Legionella pneumophila
P84838 3.78e-05 48 29 4 121 1 GDI2185 Outer membrane protein Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5)
Q8U9L5 4.04e-05 47 31 4 109 3 pal Peptidoglycan-associated lipoprotein Agrobacterium fabrum (strain C58 / ATCC 33970)
P80444 0.000113 42 80 0 21 1 ompA Outer membrane protein A (Fragment) Actinobacillus lignieresii
Q89AJ5 0.000114 45 31 1 86 3 pal Peptidoglycan-associated lipoprotein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P10324 0.000455 43 31 2 85 1 pal Peptidoglycan-associated lipoprotein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P46233 0.000891 44 38 0 55 3 motY Sodium-type flagellar protein MotY Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03855
Feature type CDS
Gene ompA
Product porin OmpA
Location 873336 - 874424 (strand: -1)
Length 1089 (nucleotides) / 362 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_185
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF00691 OmpA family
PF01389 OmpA-like transmembrane domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2885 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03286 OmpA-OmpF porin, OOP family - -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG043544 porin OmpA VF1158 Adherence

Protein Sequence

MKKTAIALAVAVAAFATAAQAAPKDNTWYTGGKLGWSQYQSTGNNWDGVNIGNGSTHKDQIGAGAFAGYQYNQYLGFELGYDWLGRMAYKGSYNNGAFKAQGIQLTTKLSYPVMDDLDVYTRLGGMVWRADSTATINATSAGTQKRFSENDTGVSPVFALGTEYAITPNIATRLEYQWINNIGDKGTLNARPDNGMLSVGVAYRFNQETPAPVVEPAPVVAPAPVVENKTFTLRSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYNLPLSEKRAQSVVDYLVSKGIPANSISAEGRGKENPVTGNTCDNIKARAALIDCLAPDRRVEIEIQGTTEVVVQPGQ

Flanking regions ( +/- flanking 50bp)

TAATAAGGCTTAAAGCCAAATGCCTAACTTGGATGATAACGAGGCGTAAAATGAAAAAGACAGCTATCGCATTAGCAGTGGCAGTGGCAGCTTTCGCAACTGCAGCGCAAGCAGCTCCAAAAGACAATACTTGGTATACCGGTGGTAAATTAGGTTGGTCTCAGTATCAAAGTACTGGTAACAATTGGGACGGCGTGAATATCGGTAACGGTAGCACACACAAAGACCAAATTGGTGCTGGTGCATTTGCTGGTTATCAGTACAACCAATACTTAGGTTTTGAACTGGGTTATGACTGGTTAGGTCGTATGGCTTATAAAGGTTCATACAACAACGGTGCATTCAAAGCTCAAGGTATCCAATTAACCACTAAATTAAGCTATCCAGTAATGGATGACTTAGACGTTTATACACGTTTAGGTGGTATGGTATGGCGTGCAGATTCAACTGCAACTATTAATGCAACTTCAGCAGGAACTCAAAAACGTTTCTCTGAAAATGATACTGGCGTTTCTCCAGTATTCGCATTAGGTACTGAATACGCGATCACTCCTAACATTGCTACTCGTCTTGAGTATCAGTGGATCAACAACATCGGTGATAAAGGTACTCTGAACGCTCGTCCAGACAATGGTATGCTGAGTGTTGGTGTTGCTTACCGTTTCAACCAAGAAACTCCAGCTCCAGTTGTTGAGCCAGCTCCAGTAGTTGCTCCAGCTCCAGTTGTTGAGAACAAAACCTTTACTCTGCGTTCAGACGTTCTGTTCAACTACAACAAATCTTCTCTGAAAGCTGAAGGTCAAGAAGCACTGAATGGTCTGTACAACGAATTAGCTAACATCGACCCAACTCAAGGTCGTGTCGTAGTTATCGGTTACACTGACCGTATCGGTTCTCAAAACTACAACCTGCCTCTGTCAGAAAAACGTGCTCAATCTGTAGTTGATTACCTAGTATCTAAAGGTATTCCTGCAAACAGCATCTCTGCAGAAGGTCGTGGTAAAGAAAACCCAGTAACTGGCAACACTTGTGACAACATCAAAGCTCGTGCAGCTCTGATCGATTGCTTAGCGCCAGACCGTCGTGTAGAAATCGAAATCCAAGGTACAACTGAAGTTGTTGTTCAACCTGGTCAATAATTCAAATAGTAGAGAAATCTACTGTAATGAATTCTAAAAAAACCCTGCTT