Homologs in group_294

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07310 FBDBKF_07310 68.5 Morganella morganii S1 pqiB intermembrane transport protein PqiB
EHELCC_03660 EHELCC_03660 68.5 Morganella morganii S2 pqiB intermembrane transport protein PqiB
NLDBIP_03660 NLDBIP_03660 68.5 Morganella morganii S4 pqiB intermembrane transport protein PqiB
LHKJJB_09490 LHKJJB_09490 68.5 Morganella morganii S3 pqiB intermembrane transport protein PqiB
HKOGLL_09485 HKOGLL_09485 68.5 Morganella morganii S5 pqiB intermembrane transport protein PqiB
F4V73_RS01495 F4V73_RS01495 68.2 Morganella psychrotolerans pqiB intermembrane transport protein PqiB
PMI_RS04915 PMI_RS04915 30.7 Proteus mirabilis HI4320 - MlaD family protein

Distribution of the homologs in the orthogroup group_294

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_294

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43671 0.0 740 63 0 540 1 pqiB Intermembrane transport protein PqiB Escherichia coli (strain K12)
P76272 2.98e-45 174 30 4 323 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P76272 2.8e-20 98 31 5 227 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P76272 4.02e-13 75 24 11 316 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P76272 2.81e-11 70 27 10 289 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P76272 0.000533 46 23 12 271 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P44288 6.76e-43 167 33 5 296 1 HI_1672 Uncharacterized protein HI_1672 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44288 6.7e-21 100 29 4 213 1 HI_1672 Uncharacterized protein HI_1672 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44288 1.47e-06 55 24 10 264 1 HI_1672 Uncharacterized protein HI_1672 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03820
Feature type CDS
Gene pqiB
Product intermembrane transport protein PqiB
Location 866305 - 867957 (strand: 1)
Length 1653 (nucleotides) / 550 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_294
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02470 MlaD protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3008 Cell wall/membrane/envelope biogenesis (M) M Intermembrane transporter PqiABC subunit PqiB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06192 paraquat-inducible protein B - -

Protein Sequence

MTEKNDTALTQAKINKLKSWSPVWIIPLVTLLIGAWILYYHFSHQGPEVTLITYNADGIEAGKTKIKSRSVDIGLVESVTLDSNFSRVIIKARLDNEMKELLRADTAFWVVKPQVGKEGVTGLGTLLSGAYIELQPGLTGKEQDEFNLLDSPPLASPDAKGIRINLVSERAGQLNAGDPVLFRGYQVGSVETSEFNIESRDMHYQLFIKAPYDKMVTSNVRFWKDSGIAFDMSSSGVRVEMASLSTLFSGGVSFDVPTGWLPGEAIAPKTEFKLYDNEKSIQNSLYTDYRSYIMFFSDSIRGLQAGAPVEFRGIRMGTVVQVPYYTQEMQQSLDKDFRIPVLIHVEPERFANDVGESFDFVKELSSAAKNGLRASLKSGNLLTGALYIDLDFYQDVEPWKGPQTVAGLPQIPTVSSGLTQIQQKVMTSLDKINNLPVEPMLKEMTATLTESQKAVAEAKETLKSLNAMIGSDDFQKLPNDIQQSLKEINRSMQGFQPGSPAYSKMVDNMQRLDQVLREMQPLLKTLNNKSNALIFEAQQGKDPEPKRAEK

Flanking regions ( +/- flanking 50bp)

GGATAAATGTACTGCCGATGATGATAAACCCATGATTAAGGAGCCTAAGGGTGACTGAAAAGAACGATACTGCTTTAACACAAGCAAAAATTAATAAACTGAAAAGCTGGTCTCCAGTTTGGATAATACCTCTTGTTACGTTATTGATAGGAGCTTGGATACTTTATTATCATTTCAGTCATCAAGGTCCTGAAGTCACATTAATAACCTATAATGCTGATGGTATTGAAGCAGGTAAAACTAAAATAAAGAGCCGCAGTGTTGATATTGGCTTAGTCGAAAGTGTGACATTAGATAGTAATTTTAGTCGAGTGATCATCAAAGCACGTCTCGATAATGAAATGAAAGAGCTACTGCGTGCTGATACCGCTTTTTGGGTGGTTAAACCACAAGTGGGAAAAGAAGGTGTCACTGGTTTAGGTACTCTACTCTCAGGTGCTTATATTGAGCTACAACCCGGTTTAACAGGTAAAGAGCAGGATGAATTTAATTTATTGGACTCTCCGCCACTGGCCTCTCCGGATGCAAAGGGGATACGCATTAATTTAGTCAGTGAAAGAGCAGGCCAGCTTAATGCAGGTGATCCGGTATTATTTAGGGGTTATCAAGTCGGCTCGGTTGAGACGAGTGAATTTAATATTGAAAGCCGAGATATGCACTACCAGCTTTTTATCAAAGCACCTTATGACAAAATGGTCACGTCGAATGTTCGTTTCTGGAAAGATTCAGGCATTGCATTTGATATGTCATCATCAGGGGTTCGTGTTGAAATGGCTTCGCTTTCCACACTGTTTAGCGGTGGGGTGAGTTTCGATGTGCCTACGGGGTGGTTACCTGGTGAAGCTATTGCCCCTAAAACAGAATTTAAACTTTATGATAACGAAAAGAGTATTCAAAATTCGTTATATACCGATTACCGTAGCTATATTATGTTTTTCTCTGATTCTATAAGAGGATTACAAGCCGGAGCGCCAGTTGAGTTCCGTGGTATTAGAATGGGTACGGTTGTTCAAGTACCCTATTACACCCAAGAAATGCAACAATCGTTAGATAAAGATTTCCGTATTCCTGTGCTTATCCATGTTGAGCCGGAACGTTTTGCGAATGATGTCGGTGAAAGTTTTGATTTCGTAAAAGAGCTTTCTTCTGCTGCTAAAAATGGATTAAGAGCATCGTTAAAATCAGGCAATCTATTAACAGGTGCGCTGTATATTGATCTGGACTTTTATCAAGATGTTGAACCTTGGAAAGGGCCACAAACTGTTGCAGGATTACCACAAATACCCACAGTCAGTTCTGGTTTAACGCAAATTCAGCAAAAAGTGATGACTTCATTGGATAAGATCAACAATCTTCCTGTTGAGCCAATGTTGAAAGAGATGACTGCGACATTAACCGAAAGTCAAAAAGCGGTTGCTGAAGCGAAGGAAACTCTGAAATCATTAAATGCTATGATTGGTAGTGATGACTTCCAAAAACTGCCTAATGATATTCAACAGTCATTAAAAGAGATCAATCGCAGTATGCAAGGTTTCCAACCTGGCTCACCGGCATACAGTAAAATGGTTGATAATATGCAACGCTTAGATCAAGTGCTCAGAGAGATGCAACCGCTATTGAAGACCTTAAACAATAAGAGCAACGCATTAATTTTTGAAGCACAACAAGGTAAAGATCCTGAACCAAAGAGGGCTGAAAAATAATGAAATATATTATTGGGATCGCGGTATTGATGCTGACGGCTTGTTCAAGT