Homologs in group_267

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07310 FBDBKF_07310 92.3 Morganella morganii S1 pqiB intermembrane transport protein PqiB
EHELCC_03660 EHELCC_03660 92.3 Morganella morganii S2 pqiB intermembrane transport protein PqiB
NLDBIP_03660 NLDBIP_03660 92.3 Morganella morganii S4 pqiB intermembrane transport protein PqiB
LHKJJB_09490 LHKJJB_09490 92.3 Morganella morganii S3 pqiB intermembrane transport protein PqiB
HKOGLL_09485 HKOGLL_09485 92.3 Morganella morganii S5 pqiB intermembrane transport protein PqiB
PMI_RS03820 PMI_RS03820 68.2 Proteus mirabilis HI4320 pqiB intermembrane transport protein PqiB
PMI_RS04915 PMI_RS04915 32.4 Proteus mirabilis HI4320 - MlaD family protein

Distribution of the homologs in the orthogroup group_267

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_267

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43671 0.0 728 63 0 539 1 pqiB Intermembrane transport protein PqiB Escherichia coli (strain K12)
P76272 3.16e-39 156 29 2 285 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P76272 2.43e-19 95 31 5 228 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P76272 4.12e-08 60 26 7 219 1 yebT Intermembrane transport protein YebT Escherichia coli (strain K12)
P44288 5.73e-38 152 31 3 274 1 HI_1672 Uncharacterized protein HI_1672 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44288 7.13e-21 100 28 5 238 1 HI_1672 Uncharacterized protein HI_1672 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44288 1.82e-08 61 25 4 166 1 HI_1672 Uncharacterized protein HI_1672 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01495
Feature type CDS
Gene pqiB
Product intermembrane transport protein PqiB
Location 334622 - 336274 (strand: 1)
Length 1653 (nucleotides) / 550 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_267
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02470 MlaD protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3008 Cell wall/membrane/envelope biogenesis (M) M Intermembrane transporter PqiABC subunit PqiB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06192 intermembrane transport protein PqiB/LetB - -

Protein Sequence

MTDADADSLTEAKVSKLKSWSPVWIIPIVTVLIGAWILISHFRGQGPEITLITYNAEGVEAGKTKIKSRSVDVGVVESVMLDQSYSRVIIKARLNAEMKDVLRKDTAFWVVKPTVGREGVSGLGTLLSGAYIQVQPAKTGAVSEEFELLDSPPLAAPDAKGIRVILTSQQAGQLNPGDAVLFRGFRVGSVETAEFNLEERDMQYELFISAPYDKLITTNVRFWKDSGISFDMSSQGVSVQMGSLSTLFSGGVSFDVPDGWQPGDEVNPKTLFKLFDNQKSTQNSLYTQYKSYLLFFSDSVRGLSPGAPVEFRGIRLGTVAQVPFYAKGLAQTFDQDFRIPVLIHIEPERFEKDVGKGFKLEKELQTALQQGLRASLKSGNLLTGALYVDLDFYPEQDAWKAPLSISDYEVLPTTSGGLVQLQQKVLAALDKINGMPIEPMMKQATDTLRASEKTIAEAQKTLSELNGLLGSKEFKALPKDLQSTLRELNRSMQGVQPGSPAYNKLVDDMQRLDQVLRELQPVLRTLNNKSNALVFEAKPQSDPQPKKGKN

Flanking regions ( +/- flanking 50bp)

ACGGGCGAAGTCTTCAGAGGAGCCTCAGCTTGAACGACAAAAATGATGATTTGACAGACGCAGATGCAGACAGCCTGACAGAGGCGAAGGTCAGCAAACTGAAAAGCTGGTCACCGGTCTGGATTATCCCCATCGTCACGGTACTGATTGGCGCCTGGATCCTCATCAGCCATTTTCGCGGGCAGGGACCGGAGATCACGCTGATAACCTATAATGCGGAAGGGGTTGAAGCCGGAAAAACCAAGATAAAAAGCCGCAGCGTGGATGTCGGTGTGGTGGAAAGCGTCATGCTGGATCAAAGCTACAGCCGCGTTATCATCAAAGCACGTCTGAATGCTGAAATGAAAGATGTGCTGCGCAAAGATACGGCGTTCTGGGTCGTCAAACCGACTGTCGGACGTGAAGGGGTAAGCGGGCTGGGCACCCTGTTGTCCGGTGCGTATATCCAGGTGCAACCGGCAAAAACCGGGGCGGTGAGCGAGGAATTTGAACTGCTCGATTCTCCACCGCTCGCAGCACCTGATGCAAAAGGGATCCGCGTGATATTAACCAGCCAGCAGGCGGGTCAGCTCAATCCCGGTGATGCGGTATTGTTCCGTGGGTTCCGCGTCGGCTCTGTGGAAACAGCTGAATTTAATCTCGAAGAGCGCGATATGCAGTATGAACTGTTTATCAGTGCGCCTTACGACAAACTGATCACCACAAATGTCCGTTTCTGGAAAGACAGCGGCATCTCCTTTGATATGTCCTCACAGGGCGTAAGTGTACAGATGGGCTCTTTATCAACGCTGTTCAGCGGTGGCGTCAGTTTTGATGTGCCGGATGGCTGGCAGCCGGGCGACGAAGTAAACCCGAAAACACTGTTTAAACTGTTTGATAACCAGAAAAGTACACAGAACTCACTGTATACCCAGTATAAAAGTTATCTGCTGTTCTTCTCTGACTCTGTCCGTGGTTTATCACCGGGCGCACCGGTGGAGTTCCGTGGTATCCGTTTAGGAACCGTGGCACAGGTGCCTTTCTATGCGAAAGGACTGGCTCAGACGTTTGATCAGGACTTCCGTATCCCGGTGCTTATCCATATCGAACCGGAACGTTTTGAGAAAGATGTCGGTAAAGGGTTCAAACTGGAAAAAGAGCTGCAAACCGCACTTCAGCAAGGGCTGCGGGCTTCACTGAAATCCGGCAACCTGCTGACCGGCGCACTGTATGTTGATCTCGATTTCTATCCGGAACAGGATGCCTGGAAAGCGCCGCTGAGTATTTCTGATTATGAAGTTCTGCCGACCACCAGTGGCGGGTTGGTTCAGCTGCAACAGAAAGTGCTTGCTGCACTGGATAAAATCAACGGTATGCCGATTGAGCCGATGATGAAACAGGCAACAGATACGCTGCGTGCCAGTGAAAAAACGATTGCCGAAGCACAGAAAACCTTGTCTGAGCTGAATGGATTACTGGGCAGCAAAGAGTTCAAGGCATTGCCTAAAGATCTGCAATCGACATTACGCGAGCTGAACCGCAGTATGCAGGGTGTTCAACCGGGATCACCGGCTTACAATAAGCTGGTTGATGATATGCAGCGCCTGGATCAGGTTCTGCGTGAACTGCAACCGGTCTTGCGGACACTGAACAATAAGAGCAATGCGCTGGTTTTTGAAGCGAAGCCGCAATCTGATCCTCAACCTAAGAAGGGGAAGAATTAAGATGAAAAACCTGGCGAAAGCTCTGGCATTTCTGGGTGTTTTTGTACTGG