Homologs in group_1167

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06700 FBDBKF_06700 75.6 Morganella morganii S1 yeaQ Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family
EHELCC_04270 EHELCC_04270 75.6 Morganella morganii S2 yeaQ Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family
NLDBIP_04270 NLDBIP_04270 75.6 Morganella morganii S4 yeaQ Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family
LHKJJB_10100 LHKJJB_10100 75.6 Morganella morganii S3 yeaQ Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family
HKOGLL_08875 HKOGLL_08875 75.6 Morganella morganii S5 yeaQ Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family
F4V73_RS00840 F4V73_RS00840 74.4 Morganella psychrotolerans - GlsB/YeaQ/YmgE family stress response membrane protein

Distribution of the homologs in the orthogroup group_1167

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1167

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64485 7.76e-21 81 70 0 82 3 yeaQ UPF0410 protein YeaQ Escherichia coli (strain K12)
P64486 7.76e-21 81 70 0 82 3 yeaQ UPF0410 protein YeaQ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P64487 7.76e-21 81 70 0 82 3 yeaQ UPF0410 protein YeaQ Escherichia coli O157:H7
P58767 1.69e-20 80 55 1 83 3 ymgE UPF0410 protein YmgE Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P76011 1.39e-19 78 54 1 83 3 ymgE UPF0410 protein YmgE Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03065
Feature type CDS
Gene -
Product GlsB/YeaQ/YmgE family stress response membrane protein
Location 675679 - 675927 (strand: 1)
Length 249 (nucleotides) / 82 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1167
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04226 Transglycosylase associated protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2261 General function prediction only (R) R Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family

Protein Sequence

MGFLSWIVFGLIAGILAKFLMPGSYDIGLIWTCILGIVGAVVGGVISNFFGKGKVDGFNFGSFVVAVIGAIVVLYLAKIFAS

Flanking regions ( +/- flanking 50bp)

TGACCATTTTTAATATACTATCTATATTATCACTACATTTAGGGGGAACTATGGGATTTCTTTCTTGGATTGTGTTCGGTCTTATTGCGGGTATCTTAGCCAAATTCTTAATGCCTGGCTCGTATGATATCGGCCTTATCTGGACCTGTATTCTAGGTATTGTGGGTGCTGTAGTTGGTGGTGTAATTAGTAATTTCTTTGGTAAAGGCAAAGTAGATGGTTTCAATTTTGGTAGTTTTGTCGTTGCCGTAATAGGGGCAATCGTTGTGCTTTATTTAGCAAAAATATTTGCCAGTTAATTGGAAATAAAGAGTCTATTAATACTATTAAACCCGCATCTGCGGGTTTA