Homologs in group_1505

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09735 FBDBKF_09735 75.0 Morganella morganii S1 pal peptidoglycan-associated lipoprotein Pal
EHELCC_04535 EHELCC_04535 75.0 Morganella morganii S2 pal peptidoglycan-associated lipoprotein Pal
NLDBIP_04535 NLDBIP_04535 75.0 Morganella morganii S4 pal peptidoglycan-associated lipoprotein Pal
LHKJJB_14095 LHKJJB_14095 75.0 Morganella morganii S3 pal peptidoglycan-associated lipoprotein Pal
HKOGLL_12440 HKOGLL_12440 75.0 Morganella morganii S5 pal peptidoglycan-associated lipoprotein Pal
F4V73_RS00605 F4V73_RS00605 75.0 Morganella psychrotolerans pal peptidoglycan-associated lipoprotein Pal

Distribution of the homologs in the orthogroup group_1505

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1505

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A914 1.11e-78 234 69 2 173 3 pal Peptidoglycan-associated lipoprotein Shigella flexneri
P0A912 1.11e-78 234 69 2 173 1 pal Peptidoglycan-associated lipoprotein Escherichia coli (strain K12)
P0A913 1.11e-78 234 69 2 173 3 pal Peptidoglycan-associated lipoprotein Escherichia coli O157:H7
P10324 7.62e-61 188 58 3 163 1 pal Peptidoglycan-associated lipoprotein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q51886 1.18e-56 177 54 2 163 3 pal Peptidoglycan-associated lipoprotein Pasteurella multocida (strain Pm70)
Q89AJ5 3.74e-42 141 40 1 172 3 pal Peptidoglycan-associated lipoprotein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P26493 6.18e-32 115 37 2 172 3 pal Peptidoglycan-associated lipoprotein Legionella pneumophila
Q9I4Z4 6.13e-30 110 51 1 107 3 pal Peptidoglycan-associated lipoprotein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A139 1.52e-28 106 42 2 145 3 pal Peptidoglycan-associated lipoprotein Pseudomonas putida
P0A138 1.52e-28 106 42 2 145 3 pal Peptidoglycan-associated lipoprotein Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P0A3S8 3.62e-26 100 37 1 148 1 pal Peptidoglycan-associated lipoprotein Brucella suis biovar 1 (strain 1330)
P0A3S7 3.62e-26 100 37 1 148 1 pal Peptidoglycan-associated lipoprotein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P0A3S9 3.62e-26 100 37 1 148 1 pal Peptidoglycan-associated lipoprotein Brucella abortus biovar 1 (strain 9-941)
Q926C3 3.31e-21 87 39 2 156 3 pal Peptidoglycan-associated lipoprotein Rhizobium meliloti (strain 1021)
Q98F85 9.55e-20 84 36 3 155 3 pal Peptidoglycan-associated lipoprotein Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q8U9L5 1.21e-19 84 45 0 102 3 pal Peptidoglycan-associated lipoprotein Agrobacterium fabrum (strain C58 / ATCC 33970)
P22263 3.41e-14 72 36 5 157 3 oprF Outer membrane porin F Pseudomonas syringae pv. syringae
P13794 3.82e-13 68 36 5 148 1 oprF Outer membrane porin F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q05146 3.85e-10 59 37 0 98 3 ompA Outer membrane protein A Bordetella avium
P9WIU5 6.01e-10 60 34 0 102 1 arfA Peptidoglycan-binding protein ArfA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIU4 6.01e-10 60 34 0 102 3 arfA Peptidoglycan-binding protein ArfA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A1KH31 6.01e-10 60 34 0 102 1 arfA Peptidoglycan-binding protein ArfA Mycobacterium bovis (strain BCG / Pasteur 1173P2)
P65594 6.01e-10 60 34 0 102 3 arfA Peptidoglycan-binding protein ArfA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q7NFT5 5.43e-08 54 37 1 85 1 psaB Photosystem I P700 chlorophyll a apoprotein A2 Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
P37726 8.88e-08 53 34 0 98 1 oprF Outer membrane porin F Pseudomonas fluorescens
P38399 3.82e-07 52 36 2 85 1 ompA Outer membrane protein A Yersinia pseudotuberculosis serotype I (strain IP32953)
Q8ZG77 3.82e-07 52 36 2 85 1 ompA Outer membrane protein A Yersinia pestis
P43840 1.63e-06 50 30 0 83 3 ompA Outer membrane protein P5 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P38368 1.69e-06 50 30 0 83 1 ompA Outer membrane protein P5 Haemophilus influenzae
P07050 2.8e-06 48 31 1 123 3 None Outer membrane protein P.III Neisseria gonorrhoeae
P57414 3.76e-06 48 42 0 54 3 ompA Outer membrane protein A Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P0A0V3 8.75e-06 47 34 0 93 1 rmpM Outer membrane protein class 4 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q8K9L4 9e-06 47 40 0 52 3 ompA Outer membrane protein A Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P0A0V2 1.55e-05 47 34 0 93 3 rmpM Outer membrane protein class 4 Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P45996 7.8e-05 45 27 0 83 1 ompA Outer membrane protein P5 Haemophilus influenzae
Q9I4L6 8.78e-05 44 30 0 71 1 yfiB Outer-membrane lipoprotein YfiB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9S3R8 0.000285 43 52 1 44 1 PG_0694 Outer membrane protein 40 Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
P84838 0.000341 43 28 2 113 1 GDI2185 Outer membrane protein Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5)
A3M8K2 0.000579 42 29 5 160 3 omp38 Outer membrane protein Omp38 Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P0C8Z2 0.000583 42 31 2 85 3 ompA Outer membrane protein A (Fragment) Escherichia fergusonii

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02875
Feature type CDS
Gene pal
Product peptidoglycan-associated lipoprotein Pal
Location 631909 - 632406 (strand: 1)
Length 498 (nucleotides) / 165 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1505
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00691 OmpA family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2885 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03640 peptidoglycan-associated lipoprotein - -

Protein Sequence

MQLNKVFKGLMLALPLVAVAACSSNKNDDQTDTSNNVPVTEQGPTAEELARQQLEQLKQTNIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYAKNRRAVLVY

Flanking regions ( +/- flanking 50bp)

TGTGATGCATAAGAATTATGTATGGCAAACAAATAAAGGAACAATTAGAGATGCAATTAAACAAAGTGTTTAAAGGGTTGATGTTAGCATTACCACTCGTTGCTGTTGCAGCATGTAGCTCAAACAAAAACGACGATCAAACAGATACAAGCAACAATGTACCTGTTACTGAGCAAGGCCCTACTGCTGAAGAATTAGCACGTCAGCAATTAGAACAACTGAAACAAACTAACATTGTTTACTTCGGTTTTGATAAATATGACGTTACTTCAGAATATGCTCAACTGTTAGATGCTCACGCTGCATTCCTGCGTGCTAACCCTTCAGTACGCATTACTATCGAAGGTCATGCTGACGAACGTGGTACTCCAGAATACAACATCGCGTTAGGCGAACGTCGTGCAAACGCAGTTAAAATGTATCTGCAAGGTAAAGGCGTATCAGCTGATCAATTAGCAATCGTATCTTACGGTAAAGAAAAACCTGCTGTACTGGGTCATGACGAAGCCGCTTATGCGAAAAACCGTCGTGCAGTACTGGTTTACTAAGAGAACGGCATGAACAACAGTAACTTCAGACCTTTATTGATGAGTCTGTT