Homologs in group_3688

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS01050 F4V73_RS01050 28.6 Morganella psychrotolerans - fimbrial protein
PMI_RS05720 PMI_RS05720 26.0 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS13465 PMI_RS13465 28.4 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3688

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3688

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q47199 2.97e-31 124 47 1 133 1 f17dG F17d-G fimbrial adhesin Escherichia coli
Q99003 3.5e-31 124 47 1 133 1 f17aG F17a-G fimbrial adhesin Escherichia coli
Q47200 4.86e-31 123 47 1 133 1 f17bG F17b-G fimbrial adhesin Escherichia coli
Q47341 4.91e-31 123 47 1 133 1 f17gG F17g-G fimbrial adhesin Escherichia coli
Q47033 5.33e-31 123 47 1 133 1 f17cG F17c-G fimbrial adhesin Escherichia coli
Q9RH91 5.44e-31 123 47 1 133 1 f17fG F17f-G fimbrial adhesin Escherichia coli
Q9RH92 5.61e-31 123 47 1 133 1 f17eG F17e-G fimbrial adhesin Escherichia coli
P45995 1.12e-06 53 26 8 210 3 hifE Minor fimbrial subunit HifE Haemophilus influenzae
P45994 1.29e-05 50 26 12 250 3 hifE Minor fimbrial subunit HifE Haemophilus influenzae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02635
Feature type CDS
Gene -
Product fimbrial protein
Location 575064 - 576146 (strand: -1)
Length 1083 (nucleotides) / 360 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3688
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042616 type 1 fimbrial protein VF1235 Adherence

Protein Sequence

MKRIFVILFLLTLFPSLAVAGANDYVPSPITINTSTLPVVVIGPADAHTYPRVIGELTGTSNQYIFNGGSLIALMRGKFTPTLPKIGKITYNFRQGNNTQSSDFDIFDTGVPGLGIIIGMAGYWPATPLVPINSSSIYIDPVAANTNPNAYNGATGSFGARLYVAFVATGRLPNGYVTIPTKQLGHILLESNRASLNNKRLTAPVMLNGGRIQVQSQTCSMNQKNYVVPLNTVYQSQFTSLYKEVQGGEVNIQLQCQDGIDVYATLNDATQHGNRSDILTLATDSTAKGVGLRLYKNNEVTAISYGSDTPNKGNQNQWHFSNYRGEINPRIKLKANYIKTENTITPGSVKAVATITFSYQ

Flanking regions ( +/- flanking 50bp)

CTCAAACCATTCCTGTTCAGTGTATACCGCACTCTAATTAGGAACAAACCATGAAAAGAATCTTTGTCATATTATTTCTTTTAACTCTATTCCCTAGTCTAGCTGTTGCTGGTGCAAATGACTACGTACCGTCTCCAATAACAATCAACACATCTACCCTCCCTGTTGTTGTTATTGGTCCTGCTGATGCCCATACTTACCCACGAGTGATAGGGGAACTCACCGGAACAAGTAATCAATATATATTTAACGGCGGTAGTTTAATAGCATTAATGCGTGGAAAATTTACTCCTACATTACCTAAAATAGGCAAAATCACATATAACTTTCGCCAAGGAAATAACACTCAATCTTCCGATTTCGATATATTTGATACTGGAGTTCCAGGGCTAGGTATTATTATTGGTATGGCGGGCTATTGGCCTGCAACGCCATTGGTTCCCATAAACAGCTCAAGTATATATATTGATCCTGTTGCCGCCAATACAAATCCAAATGCTTATAATGGTGCAACTGGAAGTTTTGGTGCTCGTTTATATGTTGCTTTTGTCGCAACAGGACGATTACCTAATGGGTATGTAACGATACCAACCAAACAACTGGGCCATATTTTATTGGAATCTAATCGGGCAAGTTTGAATAATAAAAGATTAACAGCTCCTGTTATGTTAAATGGAGGGCGCATCCAAGTGCAAAGCCAAACATGCTCGATGAATCAAAAGAATTATGTTGTTCCATTAAATACTGTCTATCAATCCCAGTTCACGTCTTTGTATAAAGAAGTGCAAGGAGGGGAAGTTAATATACAACTTCAATGCCAAGACGGTATTGATGTTTATGCTACATTAAATGATGCGACCCAACATGGGAATCGTTCTGATATATTAACATTAGCAACGGATTCTACGGCAAAAGGCGTTGGGCTAAGATTATATAAAAATAATGAAGTAACTGCGATTAGTTATGGTTCAGACACTCCTAACAAAGGAAATCAAAATCAATGGCATTTTTCAAATTATAGAGGAGAGATAAATCCACGTATAAAATTAAAAGCTAATTATATAAAAACAGAAAATACTATTACGCCAGGAAGTGTAAAAGCAGTAGCAACGATTACTTTTTCATATCAATAAAAATTAATTGAGTTTTATAAGTAGAGTAAAATGCTTTTATAACAAATGCT