Homologs in group_3884

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS09280 PMI_RS09280 35.4 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3884

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3884

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76500 2.37e-15 72 30 4 168 2 yfcQ Uncharacterized fimbrial-like protein YfcQ Escherichia coli (strain K12)
P76501 4.24e-11 61 33 6 132 2 yfcR Uncharacterized fimbrial-like protein YfcR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01250
Feature type CDS
Gene -
Product fimbrial protein
Location 307263 - 307781 (strand: 1)
Length 519 (nucleotides) / 172 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3884
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MFNKQRIFFFITLLSSFSLMADETANKATITNSENNLRLFGTLFIPPPCVIQNNDMIDVNFGHQLGTSRIDGINYTKTVNYTLQCEENANGWALGLSIIGSASQFDAAALQTNITDLAVHLTIDSEPFILNKRFVITSDKPPIILAVPVKKSGSTLTKGAFEATATLLAEYQ

Flanking regions ( +/- flanking 50bp)

TTCTACCACAGCGACATTGCGCATGGAATATCAGTGAGGAGATAACGGGAATGTTTAATAAACAGAGGATATTCTTTTTCATAACGTTACTTTCATCATTTTCATTAATGGCTGATGAGACGGCAAATAAGGCGACAATCACTAACAGCGAAAATAATTTGAGGTTATTTGGCACACTATTTATTCCCCCTCCTTGTGTGATCCAAAACAATGACATGATTGATGTTAATTTTGGTCACCAACTGGGAACGAGTCGCATCGATGGCATTAATTATACAAAGACCGTCAATTACACGTTGCAGTGTGAAGAAAATGCAAATGGTTGGGCATTAGGTTTATCCATTATCGGCTCTGCAAGCCAATTTGATGCGGCTGCTTTACAAACCAATATAACGGATTTAGCCGTACATCTCACGATAGATAGTGAGCCATTTATTTTAAATAAACGGTTTGTTATTACCTCTGATAAACCGCCGATTATTTTAGCTGTGCCTGTAAAAAAATCAGGAAGTACCTTAACAAAAGGTGCATTTGAGGCAACAGCAACGCTACTTGCTGAATATCAATAGGAGTATCGGGATGATATTACAAAGATTATCTCTGAGTACTGCAATCTTTG