Homologs in group_1873

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13985 FBDBKF_13985 83.8 Morganella morganii S1 relA GTP diphosphokinase
EHELCC_11660 EHELCC_11660 83.8 Morganella morganii S2 relA GTP diphosphokinase
NLDBIP_12000 NLDBIP_12000 83.8 Morganella morganii S4 relA GTP diphosphokinase
LHKJJB_11860 LHKJJB_11860 83.8 Morganella morganii S3 relA GTP diphosphokinase
HKOGLL_10475 HKOGLL_10475 83.8 Morganella morganii S5 relA GTP diphosphokinase
F4V73_RS12840 F4V73_RS12840 82.5 Morganella psychrotolerans relA GTP diphosphokinase

Distribution of the homologs in the orthogroup group_1873

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1873

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AG23 0.0 1225 77 1 744 3 relA GTP pyrophosphokinase Shigella flexneri
P0AG20 0.0 1225 77 1 744 1 relA GTP pyrophosphokinase Escherichia coli (strain K12)
P0AG21 0.0 1225 77 1 744 3 relA GTP pyrophosphokinase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG22 0.0 1225 77 1 744 3 relA GTP pyrophosphokinase Escherichia coli O157:H7
P44644 0.0 1001 62 8 752 3 relA GTP pyrophosphokinase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55133 0.0 986 62 4 747 3 relA GTP pyrophosphokinase Photobacterium angustum (strain S14 / CCUG 15956)
O54408 5.64e-179 532 36 12 745 1 relA GTP pyrophosphokinase Bacillus subtilis (strain 168)
Q6GG70 8.78e-169 506 38 12 706 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MRSA252)
P0A0E9 1.71e-168 505 38 12 706 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MW2)
P0A0F0 1.71e-168 505 38 12 706 3 relA GTP pyrophosphokinase Staphylococcus aureus
Q6G8T5 1.71e-168 505 38 12 706 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MSSA476)
Q99TL8 1.71e-168 505 38 12 706 1 relA GTP pyrophosphokinase Staphylococcus aureus (strain N315)
Q931Q4 4.76e-168 504 38 12 706 1 relA GTP pyrophosphokinase Staphylococcus aureus (strain Mu50 / ATCC 700699)
P74007 2.6e-167 503 38 11 706 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O52177 5.57e-163 492 35 10 728 3 relA GTP pyrophosphokinase Myxococcus xanthus
O87331 1.36e-161 488 35 13 733 3 relA GTP pyrophosphokinase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8CS97 6.38e-159 481 37 11 706 3 relA GTP pyrophosphokinase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNR8 6.38e-159 481 37 11 706 3 relA GTP pyrophosphokinase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P52560 3.64e-157 480 35 11 746 3 relA GTP pyrophosphokinase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P9WHG9 7.23e-157 476 36 11 691 1 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHG8 7.23e-157 476 36 11 691 3 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66015 1.61e-156 476 36 11 691 3 relA Probable GTP pyrophosphokinase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q54089 3.61e-156 474 36 15 716 1 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Streptococcus dysgalactiae subsp. equisimilis
O67012 9.39e-155 469 34 10 742 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Aquifex aeolicus (strain VF5)
Q49640 6.09e-153 467 36 12 689 3 relA Probable GTP pyrophosphokinase Mycobacterium leprae (strain TN)
O85709 1.09e-148 457 34 12 749 3 relA GTP pyrophosphokinase Streptomyces antibioticus
Q9KNM2 5.04e-132 410 31 9 697 1 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0AG26 1.48e-127 399 31 8 698 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Shigella flexneri
P0AG24 1.48e-127 399 31 8 698 1 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT Escherichia coli (strain K12)
P0AG25 1.48e-127 399 31 8 698 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Escherichia coli O157:H7
P43811 1.14e-111 356 29 11 699 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5VPI9 4.78e-106 343 30 13 722 3 rsh GTP pyrophosphokinase rsh Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YG65 5.89e-106 343 30 13 722 1 rsh GTP pyrophosphokinase rsh Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8CY42 6.41e-106 343 30 13 722 1 rsh GTP pyrophosphokinase rsh Brucella suis biovar 1 (strain 1330)
Q57E90 7.83e-106 343 30 13 722 1 rsh GTP pyrophosphokinase rsh Brucella abortus biovar 1 (strain 9-941)
Q2YN11 7.83e-106 343 30 13 722 3 rsh GTP pyrophosphokinase rsh Brucella abortus (strain 2308)
O34098 3.16e-105 342 30 15 705 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Spiroplasma citri
O51216 2.48e-89 297 34 8 469 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P0DKG8 2.82e-63 230 30 14 511 1 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Arabidopsis thaliana
F4JHA2 6.24e-62 226 30 15 512 1 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Arabidopsis thaliana
Q9SYH1 2.14e-61 222 33 9 386 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Arabidopsis thaliana
Q9AYT5 1.81e-60 223 28 12 504 2 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Oryza sativa subsp. japonica
Q9M5P5 1.19e-59 218 33 10 386 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Arabidopsis thaliana
Q9LVJ3 1.39e-58 214 33 6 351 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Arabidopsis thaliana
Q9M5P6 2.8e-57 211 33 6 351 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Arabidopsis thaliana
Q67UU0 3.19e-56 207 35 5 342 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Oryza sativa subsp. japonica
Q7XAP4 2.73e-54 202 34 6 343 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Oryza sativa subsp. japonica
P75386 2.26e-42 168 24 13 602 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47520 3.79e-35 146 23 11 586 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q6ATB4 2.58e-26 117 31 5 248 1 CRSH1 GTP diphosphokinase CRSH1, chloroplastic Oryza sativa subsp. japonica
Q84R11 1.01e-24 112 25 6 332 2 CRSH Probable GTP diphosphokinase CRSH, chloroplastic Arabidopsis thaliana
Q4UMH6 2.6e-22 106 31 3 208 4 RF_0381 Putative ankyrin repeat protein RF_0381 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q75IS2 9.19e-21 100 27 5 252 1 CRSH3 GTP diphosphokinase CRSH3, chloroplastic Oryza sativa subsp. japonica
Q6ATB2 8.96e-20 97 27 7 252 1 CRSH2 GTP diphosphokinase CRSH2, chloroplastic Oryza sativa subsp. japonica
P39583 2.57e-05 49 29 2 119 1 ywaC GTP pyrophosphokinase YwaC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01045
Feature type CDS
Gene relA
Product GTP diphosphokinase
Location 257486 - 259726 (strand: 1)
Length 2241 (nucleotides) / 746 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1873
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02824 TGS domain
PF04607 Region found in RelA / SpoT proteins
PF13291 ACT domain
PF13328 HD domain
PF19296 RelA/SpoT, AH and RIS domains

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0317 Signal transduction mechanisms (T)
Transcription (K)		 TK (p)ppGpp synthase/hydrolase, HD superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00951 GTP pyrophosphokinase [EC:2.7.6.5] Purine metabolism
Metabolic pathways		 -

Protein Sequence

MVAVRSAHLTPAGEFAVDKWVNSLNLTHANAGSEIMQTWEYCHRTVLGREDAQLLLWRGVEMVELLSTLSMDKDSMRAALLFPLAEEDLINQEVITEHFGEAIWNLVRGVMEMDAIRQLKATHTNETSSVQVDNVRRMLLSMVEDFRCVVIKLAERIAHLREVKDATEDERVLAAKECFNIYAPLANRLGIGQLKWELEDFCFRYLHPDEYKQIANLLHERRIDREQYIDNFVSTVRGYMQQENIEVDIYGRPKHIYSIWRKMKKKNLAFDELFDVRAVRIVVERLQDCYAALGIVHTHFRHLPDEFDDYVANPKPNGYQSIHTVVLGPEGKTVEIQIRTRQMHEDAELGVAAHWKYKEGATGATTKGGTGSYENRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVIDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFSYQLQMGDQIEIITQKHPNPSRDWLNPNLGYVTTSRGRAKIHNWFRKQDRDKNIIAGRQILDNELAPLDINMKEAEKLLIARYNVHSLDEVLAGIGVGDIRINQLVNFLQSKLNKATAEDEDKEALRSLENKTATPKTTTSGGGSIVVEGVGNLMHHIARCCQPIPGDNIVGFITKGRGISIHRADCDQLAELLSHAPERIVDAVWGENYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQIATIDMNIEIYNLQVLGRILAKLNQLPDVIEAKRFSH

Flanking regions ( +/- flanking 50bp)

TAGCCACTCAATAAGTCGCAGATAAGATTTATATCGAGTAGGGAGAGAATATGGTTGCAGTTAGAAGTGCTCACTTAACACCTGCAGGGGAGTTTGCCGTTGATAAATGGGTTAATAGCTTGAATTTAACTCATGCGAATGCGGGGAGTGAAATCATGCAAACCTGGGAATACTGTCATCGTACTGTTCTGGGCCGTGAAGATGCGCAACTGTTGCTATGGCGCGGTGTTGAGATGGTTGAACTTCTTTCGACACTCAGTATGGATAAAGATAGCATGAGGGCAGCACTTCTCTTCCCACTTGCTGAAGAAGATCTTATTAACCAGGAAGTTATCACTGAACATTTTGGTGAGGCGATATGGAATTTAGTGCGTGGCGTAATGGAGATGGATGCTATTCGCCAGCTTAAAGCGACACATACCAACGAAACTAGCTCAGTACAAGTCGATAATGTACGCCGTATGTTATTGTCTATGGTAGAAGATTTTCGTTGTGTAGTTATTAAACTCGCAGAGCGGATTGCCCATTTACGTGAAGTGAAAGATGCCACTGAGGATGAACGAGTCTTAGCGGCAAAAGAGTGTTTTAATATCTATGCACCATTAGCCAATCGATTGGGGATTGGACAATTAAAATGGGAGCTTGAAGATTTCTGTTTCCGTTATCTTCATCCTGATGAATATAAGCAAATTGCAAATTTACTGCATGAACGCCGTATTGATCGCGAACAGTATATTGATAATTTCGTCAGTACGGTGCGTGGTTATATGCAGCAAGAGAATATTGAAGTCGATATCTACGGACGTCCCAAGCACATCTATAGTATTTGGCGAAAAATGAAGAAAAAAAATCTCGCCTTTGATGAGCTATTTGATGTTCGTGCGGTACGTATTGTTGTCGAACGCCTACAAGATTGTTATGCCGCTTTAGGTATTGTACATACTCATTTTCGTCATTTACCCGATGAATTTGATGATTATGTTGCCAATCCAAAACCAAATGGTTACCAATCTATTCATACGGTAGTACTTGGCCCTGAAGGTAAAACCGTTGAGATCCAAATACGTACTCGTCAGATGCATGAAGATGCTGAATTAGGTGTTGCAGCGCATTGGAAATATAAAGAAGGTGCTACTGGTGCAACAACCAAAGGCGGGACGGGAAGTTATGAAAATCGTATTGCGTGGTTACGTAAATTAATTGCATGGCAAGAAGAGATGGCTGATTCTGGTGAAATGCTAGATGAAGTACGTAGCCAAGTATTTGATGATCGCGTCTATGTCTTTACGCCAAAAGGGGATGTGATTGATTTACCTGCAGGCTCGACACCATTAGATTTTGCTTATCATATTCATAGTGATGTTGGTCATCGCTGTATTGGTGCTAAAATCGGCGGGCGCATCGTTCCATTTAGCTATCAGCTACAAATGGGCGATCAAATTGAAATTATTACTCAAAAACACCCTAATCCAAGCCGAGATTGGCTAAATCCTAATCTTGGTTATGTGACAACCAGTCGTGGTAGAGCAAAGATCCACAACTGGTTCCGTAAACAAGATCGCGATAAAAATATTATTGCAGGCCGCCAAATCTTAGATAATGAATTAGCGCCGCTTGATATTAATATGAAAGAAGCAGAAAAACTGCTGATTGCTCGTTATAACGTCCATAGTCTTGATGAAGTGCTGGCAGGTATAGGCGTTGGTGATATCCGTATCAATCAATTAGTCAATTTCTTACAAAGTAAGCTGAATAAAGCCACAGCGGAAGATGAAGACAAAGAGGCGTTACGCTCATTAGAAAATAAAACGGCTACACCAAAAACAACCACGTCAGGTGGTGGCAGTATTGTGGTCGAGGGTGTCGGGAACTTAATGCATCATATCGCACGTTGTTGCCAACCTATTCCAGGCGATAATATCGTTGGATTTATTACCAAAGGACGTGGTATTTCAATTCACCGTGCAGATTGTGATCAATTAGCTGAGTTACTTTCTCACGCACCAGAGCGTATTGTCGATGCGGTGTGGGGTGAGAATTACTCAAGTGGTTATTCATTAGTGGTACGGGTTGTGGCTAATGATCGTAGTGGTTTATTACGCGATATCACCACTATTTTAGCTAATGAAAAAGTGAATGTGCTGGGAGTTAGTAGCCGCAGTGATGTGAAGCAACAAATAGCGACCATTGATATGAATATTGAGATTTATAATCTCCAAGTATTAGGGCGTATTTTAGCGAAACTCAATCAATTACCTGATGTCATAGAAGCCAAACGCTTTTCTCATTAAGACATTGGTCACCTTAACGGATAAAATGCCAAGCACAATGTGTCTTGGCA