Homologs in group_1298

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07945 FBDBKF_07945 48.2 Morganella morganii S1 yacC YacC family pilotin-like protein
EHELCC_13775 EHELCC_13775 48.2 Morganella morganii S2 yacC YacC family pilotin-like protein
NLDBIP_14220 NLDBIP_14220 48.2 Morganella morganii S4 yacC YacC family pilotin-like protein
LHKJJB_08630 LHKJJB_08630 48.2 Morganella morganii S3 yacC YacC family pilotin-like protein
HKOGLL_08180 HKOGLL_08180 48.2 Morganella morganii S5 yacC YacC family pilotin-like protein
F4V73_RS13040 F4V73_RS13040 51.8 Morganella psychrotolerans - YacC family pilotin-like protein

Distribution of the homologs in the orthogroup group_1298

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1298

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA95 1.04e-32 113 47 0 113 3 yacC Uncharacterized protein YacC Escherichia coli (strain K12)
P0AA96 1.04e-32 113 47 0 113 3 yacC Uncharacterized protein YacC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00765
Feature type CDS
Gene -
Product YacC family pilotin-like protein
Location 195140 - 195490 (strand: -1)
Length 351 (nucleotides) / 116 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1298
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS)

Protein Sequence

MKKMFALFCTIILSFATLFSSSAKALTYTQAEDLADLTAVYLFLNNDCGYEQISKQKIERALIIFSQSQQWDVSNYSMLPMSKLNEDSYQDLKNIQIAHNKKCQLLAQKSLSLLNY

Flanking regions ( +/- flanking 50bp)

GTCAAATAACAAATCTTGTGAAATCATCACATATAGGAATGTCACCACTAATGAAAAAAATGTTCGCTTTGTTCTGCACTATTATTCTTTCTTTTGCCACGCTTTTTTCTTCTAGTGCAAAAGCACTCACTTATACTCAAGCAGAAGACTTAGCTGATTTAACCGCGGTATACCTGTTTTTAAATAATGATTGTGGTTATGAGCAGATCTCAAAACAAAAAATAGAACGAGCGCTGATTATTTTTTCACAATCTCAGCAGTGGGATGTCTCTAATTATTCAATGCTCCCAATGAGCAAGCTTAATGAAGATAGTTATCAGGATTTAAAAAATATACAAATTGCTCATAACAAAAAATGTCAACTACTAGCCCAAAAATCACTTAGCTTACTAAACTATTAATTGTATAAAAAAGCCACTCTATCAAACTGATACAGTGGCTTTTCAATTTA