Homologs in group_1355

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07945 FBDBKF_07945 82.5 Morganella morganii S1 yacC YacC family pilotin-like protein
EHELCC_13775 EHELCC_13775 82.5 Morganella morganii S2 yacC YacC family pilotin-like protein
NLDBIP_14220 NLDBIP_14220 82.5 Morganella morganii S4 yacC YacC family pilotin-like protein
LHKJJB_08630 LHKJJB_08630 82.5 Morganella morganii S3 yacC YacC family pilotin-like protein
HKOGLL_08180 HKOGLL_08180 82.5 Morganella morganii S5 yacC YacC family pilotin-like protein
PMI_RS00765 PMI_RS00765 51.8 Proteus mirabilis HI4320 - YacC family pilotin-like protein

Distribution of the homologs in the orthogroup group_1355

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1355

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA95 4.88e-34 117 56 0 94 3 yacC Uncharacterized protein YacC Escherichia coli (strain K12)
P0AA96 4.88e-34 117 56 0 94 3 yacC Uncharacterized protein YacC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13040
Feature type CDS
Gene -
Product YacC family pilotin-like protein
Location 222504 - 222848 (strand: 1)
Length 345 (nucleotides) / 114 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000003
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1355
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS)

Protein Sequence

MKILLSLFISFALLLSFPAKALTPSQAEDLAGLTAVFIYLKNDCGYQDLQNARIEKAILLFAQSNRWDMSNYNMKEMAKMNKENYLDIKEIKLSENYKCTALARDSLSLLAYVK

Flanking regions ( +/- flanking 50bp)

CTATTAAAATCTTCACCTAAACTGACAAGCGTTACCGGTACACTACCTTTATGAAAATATTACTTAGTCTTTTTATCAGCTTTGCATTGTTGCTTTCCTTTCCTGCGAAAGCACTGACGCCGTCACAGGCTGAAGATCTTGCCGGGCTGACGGCTGTTTTTATCTATCTGAAGAATGATTGTGGCTATCAGGATCTGCAGAATGCCCGTATCGAAAAAGCCATTTTATTATTTGCACAAAGTAACCGCTGGGATATGAGCAATTACAACATGAAAGAGATGGCAAAAATGAATAAAGAGAATTATCTCGATATCAAAGAGATCAAGCTCTCAGAAAACTATAAATGCACCGCTCTTGCCCGCGATTCACTCTCACTGCTTGCCTACGTAAAATAATCGGCCTGCCGGTTGCCGGTAAATTGCCCGCAACCGAATCGGTTTAGCTG