Homologs in group_1298

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07945 FBDBKF_07945 100.0 Morganella morganii S1 yacC YacC family pilotin-like protein
EHELCC_13775 EHELCC_13775 100.0 Morganella morganii S2 yacC YacC family pilotin-like protein
LHKJJB_08630 LHKJJB_08630 100.0 Morganella morganii S3 yacC YacC family pilotin-like protein
HKOGLL_08180 HKOGLL_08180 100.0 Morganella morganii S5 yacC YacC family pilotin-like protein
F4V73_RS13040 F4V73_RS13040 82.5 Morganella psychrotolerans - YacC family pilotin-like protein
PMI_RS00765 PMI_RS00765 48.2 Proteus mirabilis HI4320 - YacC family pilotin-like protein

Distribution of the homologs in the orthogroup group_1298

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1298

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA95 1.05e-36 124 51 1 115 3 yacC Uncharacterized protein YacC Escherichia coli (strain K12)
P0AA96 1.05e-36 124 51 1 115 3 yacC Uncharacterized protein YacC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P20440 4.02e-05 43 29 2 87 1 pulS Pullulanase secretion protein PulS Klebsiella pneumoniae

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_14220
Feature type CDS
Gene yacC
Product YacC family pilotin-like protein
Location 115625 - 116038 (strand: -1)
Length 414 (nucleotides) / 137 (amino acids)

Contig

Accession ZDB_529
Length 159829 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1298
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS)

Protein Sequence

MTFATKLLKSSHKLTGATGKLLTMKIFIHALFSCALLLSLPAKALTPSQAEDLAGLTAVFIYLKNDCGYGDLPNARIEKAILLFAKSNRWDMSNYDTRQMAEMNKENYFDIKHIKLPENYKCTALARDSLPLLAYVK

Flanking regions ( +/- flanking 50bp)

AATGTATTCCCTTCTCCGGAATAAGGGCTTTACACCACTTTAGTCAGCGGATGACATTCGCGACAAAACTATTAAAATCTTCACATAAACTGACAGGCGCCACCGGTAAACTACTTACTATGAAAATATTCATTCACGCTTTATTCAGCTGTGCCCTGCTGCTTTCCCTGCCCGCGAAAGCGCTGACGCCGTCACAGGCTGAAGACCTCGCCGGACTGACTGCGGTTTTTATTTATCTGAAAAATGATTGCGGCTACGGGGATTTACCGAATGCCCGCATCGAAAAAGCGATCTTACTGTTTGCCAAAAGTAACCGCTGGGATATGAGCAATTATGATACCCGGCAGATGGCGGAAATGAATAAAGAGAACTATTTCGACATCAAACATATAAAGCTGCCGGAAAACTACAAATGCACCGCACTGGCCCGTGATTCACTGCCGTTGCTTGCCTATGTGAAATAATTTACCTGCAACCGAATCGGTTAAGCGGTAAAAAAACAGCCGGGGAGCGG